Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007259113.3 |
| length | 1283 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 6 |
| gene id | chmp2a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 2131018 ~ 2134043 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0015031 | protein transport | biological_process |
| GO:0031902 | late endosome membrane | cellular_component |
| id | description |
|---|---|
| K12191 | CHMP2A; charged multivesicular body protein 2A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU45517 | lncRNA | downstream | 846 | 2128267 ~ 2130172 (-) | True | G33804 |
| XR_002649842.1 | lncRNA | downstream | 47775 | 2080975 ~ 2083243 (-) | True | LOC111192348 |
| TU45446 | lncRNA | downstream | 56412 | 2074335 ~ 2074606 (-) | True | G33759 |
| TU45403 | lncRNA | downstream | 154433 | 1976329 ~ 1976585 (-) | True | G33732 |
| TU45402 | lncRNA | downstream | 154910 | 1975829 ~ 1976108 (-) | True | G33731 |
| TU45554 | lncRNA | upstream | 58047 | 2192090 ~ 2192968 (-) | True | G33833 |
| TU45556 | lncRNA | upstream | 60244 | 2194287 ~ 2194607 (-) | True | G33835 |
| TU45586 | lncRNA | upstream | 152227 | 2286270 ~ 2287428 (-) | True | G33853 |
| TU45658 | lncRNA | upstream | 184565 | 2318608 ~ 2318897 (-) | True | G33909 |
| TU45660 | lncRNA | upstream | 199231 | 2333274 ~ 2334121 (-) | True | G33911 |
| XM_007259107.3 | mRNA | downstream | 10635 | 2117540 ~ 2120383 (-) | True | snf8 |
| XM_022668901.1 | mRNA | downstream | 43451 | 2075687 ~ 2087567 (-) | False | LOC103023976 |
| XM_007259099.3 | mRNA | downstream | 43481 | 2075687 ~ 2087537 (-) | True | LOC103023976 |
| XM_022668900.1 | mRNA | downstream | 45058 | 2074630 ~ 2085960 (-) | False | LOC103023976 |
| XM_022668898.1 | mRNA | downstream | 45058 | 2075687 ~ 2085960 (-) | False | LOC103023976 |
| XM_022668916.1 | mRNA | upstream | 142714 | 2276757 ~ 2282984 (-) | False | psme3 |
| XM_007259128.3 | mRNA | upstream | 142714 | 2276757 ~ 2281258 (-) | True | psme3 |
| XM_007259140.3 | mRNA | upstream | 490895 | 2624938 ~ 2637751 (-) | True | dhx8 |
| XM_022669429.1 | mRNA | upstream | 1087304 | 3221347 ~ 3222998 (-) | True | LOC111192418 |
| XM_007259177.3 | mRNA | upstream | 1206569 | 3340612 ~ 3380599 (-) | True | ogfod3 |
| TU45452 | other | downstream | 88744 | 2035094 ~ 2042274 (-) | False | LOC103022010 |
| TU45451 | other | downstream | 88744 | 2036125 ~ 2042274 (-) | False | LOC103022010 |
| XR_002649841.1 | other | downstream | 96548 | 2022741 ~ 2034470 (-) | False | LOC103022010 |
| TU45334 | other | downstream | 318396 | 1810586 ~ 1812622 (-) | True | G33675 |
| trnar-ccu | other | downstream | 1004551 | 1126395 ~ 1126467 (-) | True | trnar-ccu |
| TU45542 | other | upstream | 34980 | 2169023 ~ 2177059 (-) | True | G33823 |
| TU45557 | other | upstream | 60714 | 2194757 ~ 2196095 (-) | True | G33836 |
| TU45650 | other | upstream | 169219 | 2303262 ~ 2309329 (-) | True | G33904 |
| TU45820 | other | upstream | 1047125 | 3181168 ~ 3194377 (-) | True | G34046 |
| TU45985 | other | upstream | 1649082 | 3783125 ~ 3789192 (-) | True | prr15l |
