Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007259311.3 |
| length | 1476 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 7 |
| gene id | LOC103030206 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 6675542 ~ 6680021 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006886 | intracellular protein transport | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0015450 | P-P-bond-hydrolysis-driven protein transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K17794 | TIM23; mitochondrial import inner membrane translocase subunit TIM23 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU47004 | lncRNA | upstream | 5551 | 6669762 ~ 6669991 (+) | True | G34916 |
| TU46988 | lncRNA | upstream | 11559 | 6663657 ~ 6663983 (+) | True | G34903 |
| TU46985 | lncRNA | upstream | 11935 | 6592607 ~ 6663607 (+) | True | LOC103029551 |
| TU46972 | lncRNA | upstream | 134082 | 6502145 ~ 6541460 (+) | False | slc38a10 |
| TU46971 | lncRNA | upstream | 134193 | 6502145 ~ 6541349 (+) | False | slc38a10 |
| TU47011 | lncRNA | downstream | 9771 | 6689792 ~ 6690139 (+) | True | G34923 |
| TU47020 | lncRNA | downstream | 38769 | 6718790 ~ 6719186 (+) | True | G34930 |
| TU47121 | lncRNA | downstream | 129207 | 6809228 ~ 6942271 (+) | True | G35012 |
| TU47129 | lncRNA | downstream | 200462 | 6880483 ~ 6891804 (+) | True | G35016 |
| TU47130 | lncRNA | downstream | 200462 | 6880483 ~ 6891804 (+) | False | G35016 |
| XM_007259309.3 | mRNA | upstream | 11955 | 6619670 ~ 6663587 (+) | False | LOC103029551 |
| XM_007259310.3 | mRNA | upstream | 14890 | 6619671 ~ 6660652 (+) | False | LOC103029551 |
| XM_007259308.3 | mRNA | upstream | 86922 | 6583214 ~ 6588620 (+) | True | prph2 |
| XM_007259307.3 | mRNA | upstream | 94283 | 6579898 ~ 6581259 (+) | True | tbcc |
| XM_007259304.3 | mRNA | upstream | 108436 | 6560860 ~ 6567106 (+) | True | LOC103028092 |
| XM_007259314.3 | mRNA | downstream | 18618 | 6698639 ~ 6704998 (+) | True | LOC103031150 |
| XM_022669020.1 | mRNA | downstream | 20238 | 6700259 ~ 6704998 (+) | False | LOC103031150 |
| XM_007259362.3 | mRNA | downstream | 53290 | 6733311 ~ 6776528 (+) | True | LOC103046215 |
| XM_007259318.3 | mRNA | downstream | 98181 | 6778202 ~ 6877033 (+) | False | LOC103031986 |
| XM_007259317.3 | mRNA | downstream | 100725 | 6780746 ~ 6877033 (+) | False | LOC103031986 |
| XR_002649861.1 | other | upstream | 11955 | 6619670 ~ 6663587 (+) | False | LOC103029551 |
| XR_455629.3 | other | upstream | 14291 | 6619671 ~ 6661251 (+) | False | LOC103029551 |
| TU46176 | other | upstream | 2497459 | 4171051 ~ 4178083 (+) | False | G34309 |
| TU45414 | other | upstream | 4618668 | 2050798 ~ 2056874 (+) | True | amz2 |
| trnaq-cug_1 | other | upstream | 4837966 | 1837505 ~ 1837576 (+) | True | trnaq-cug_1 |
| TU47021 | other | downstream | 50933 | 6730954 ~ 6731424 (+) | True | G34931 |
| TU47135 | other | downstream | 222396 | 6902417 ~ 6903997 (+) | True | G35021 |
| TU48089 | other | downstream | 3793353 | 10473374 ~ 10474792 (+) | False | G35744 |
| TU48092 | other | downstream | 3793353 | 10473374 ~ 10475783 (+) | False | G35744 |
| TU48150 | other | downstream | 4314340 | 10994361 ~ 11001539 (+) | False | dock1 |
