RNA id: XM_007259338.2



Basic Information


Item Value
RNA id XM_007259338.2
length 959
RNA type mRNA
GC content 0.44
exon number 4
gene id armc7
representative False

Chromosome Information


Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 7113126 ~ 7115766 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


TATTTGGGACTGAAGCAAAGAAACATGGCGTGTTACTTGTGACTGCTAGCTTGGTTGACTAGCCAGCTAATATTTAGCAATCTGTATTAAATCACAATGATATAGTTATCTAGAGACATCATATTTAACTACATCCACCCAGCAAGTCCTCCGCTAagtagctaagctagttaactAGAGTTTTTAAGcgtgttttctttttctaaagTAGCCTAGTAGTAGTGAATTTGCTTGCAATCTAATGTTTATTAGattttgtcaGGCATGGATCGATTCTGTGCATCAGAAAGGTTTGAATATCTGCAGGGGCTGGTGACTGAGTTTCAGGATACGGATAGTGAAGAAGCTAAAGAGCAAGTTCTGGCCAATTTGGCCAACTTTGCTTATGATCCTCGTAACATGGAAGCCTTGAGGATGCTGCAAGTGACTGAGCTCTTTTTGGACATGCTGACAGAAGAAAATGAGAACTTTGTGGAGTTTGGAATTGGTGGCCTGTGTAACATCAGCATGGACCAAGAATGTCGTGACCAGATTTTGGAGAGTGAAGGAATTCCGCTGGTGGTTGGATGCTTGTCCAGCCTCAGAGACGAGACCGTTCTCTCTGCCATCACAACACTAATGAACCTTTCCACAGCAGCGTCCCACTCCAAAATCACAGACAGTGCGGTGGTGCAGTGCATGCTGCGCTTCTCACTTACACAGAACCCTCGCCTCAGCAACCTGGCCACGGTCTTCCTGCAGGACTACTGCTCACAGGAACAGGTGAACAGAGCCAGAGAACTGATGGAAGGACACAGCCAGTCAGCAGTCGGAATTCCACTGCCAAAAAACTAGCAAACCATTCCGTGCTTGTTAGATCTTTGGAGATGGTCATGAATGGTTCTGGTGCTGGGACTGTGATGTTTgagtttcctttttttatatttataaatgtcttCTGTGTATTTTGTCCCACATTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU47273 lncRNA downstream 35497 7077225 ~ 7077629 (-) True G35099
TU47266 lncRNA downstream 46420 7064525 ~ 7066706 (-) True G35094
TU47231 lncRNA downstream 72484 7036261 ~ 7040642 (-) True G35078
TU47229 lncRNA downstream 77308 7034730 ~ 7035818 (-) True G35077
TU47220 lncRNA downstream 151133 6961173 ~ 6961993 (-) True G35069
TU47316 lncRNA upstream 6717 7122483 ~ 7123019 (-) True G35135
TU47409 lncRNA upstream 287403 7403169 ~ 7404536 (-) True G35203
TU47408 lncRNA upstream 287916 7403682 ~ 7404536 (-) False G35203
TU47411 lncRNA upstream 287916 7403682 ~ 7404536 (-) False G35203
TU47480 lncRNA upstream 933776 8049542 ~ 8051653 (-) True G35266
XM_007259336.3 mRNA downstream 9106 7097042 ~ 7104020 (-) True chad
XM_022669034.1 mRNA downstream 37285 7069209 ~ 7075841 (-) False faap100
XM_007259335.3 mRNA downstream 37285 7069209 ~ 7075841 (-) True faap100
XM_007259327.3 mRNA downstream 92357 7002140 ~ 7020769 (-) True sec24c
XM_007259363.3 mRNA upstream 56901 7172667 ~ 7229961 (-) True LOC103046826
XM_007259341.3 mRNA upstream 133199 7248965 ~ 7265703 (-) True LOC103039554
XM_007259340.3 mRNA upstream 152171 7267937 ~ 7271599 (-) True LOC103039244
XM_022669412.1 mRNA upstream 232980 7348746 ~ 7350459 (-) True LOC111192401
XM_022669046.1 mRNA upstream 1205483 8321249 ~ 8338621 (-) False LOC103037651
TU47076 other downstream 459541 6619680 ~ 6653585 (-) True G34981
TU47043 other downstream 571762 6537021 ~ 6541364 (-) True G34953
TU47031 other downstream 599425 6465368 ~ 6513701 (-) False LOC103026268
TU46775 other downstream 1173726 5935835 ~ 5939400 (-) True G34770
XR_455628.3 other downstream 1184972 5907974 ~ 5928154 (-) False ccdc186
TU47717 other upstream 1809062 8924828 ~ 8927717 (-) True G35429
TU47824 other upstream 2088804 9204570 ~ 9205911 (-) True G35512
TU47866 other upstream 2310309 9426075 ~ 9431164 (-) False rpl38
TU47867 other upstream 2311070 9426836 ~ 9431164 (-) False rpl38
TU47869 other upstream 2311070 9426836 ~ 9431228 (-) True rpl38

Expression Profile