RNA id: XM_022669441.1


Basic Information

Item Value
RNA id XM_022669441.1
length 7241
RNA type mRNA
GC content 0.51
exon number 22
gene id wnk4
representative True

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 17711000 ~ 17784278 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

CTGTGTTCATCACAGCAGCGCGCGAGACAGAGCAGTGTGGGGATAGAGAATGAGCAGTGGTGTTTAGAGCTGTGGAGCGGGGTTGGATTACTGTTTATCGTTAAAAGTTGAGGACAAAATAAGAAGATGCACCACAGCAGAACATCACAGATGCCTCCCCAGGCAGTGAACGGCTGATCAGCTGCTGCAGAGCATTGGACGTGAAACCAGATTATACCGTCATCCCCCTTCAGACTACTTTAAACTCTCCCAGCATGTCTCATGCTCAGGTGGAGCTGCCTGGACTTGGCTTTCCGAGTTTACCTGTTGATCTAGACCCTGAGTGTGCAGAGAGAAGGTCCATCAGGAGGAACTCCTATGTTATTCACAAACTTAATGTTGACATCGAGTCTCAGTTTTTTAATGGAGCACTGTCCTGGCCCTCGGAGAATGTACTGTGCGAGAACAGGACAGAAGAAGGGAAGGTGGACACCTGTCCACCGTCACCTTCTCCGGTCTCCAGTCCCAAGACCCCCACCCCACAGAGCTGCTGTTCTCCTTCAGAAACCCCAGGGCCATGGAGGGTCTCGGGGCAAGACCCCAGCTCAGACTCTGATCCTGAAGCAGCCAAGCCGGGGAAGGTGAAGCCCCGGATGGAGAGCAGGTGGGAgctggaggagaaggaggacaTGGAGACCAAAGCTGTGGCCACCTCGCCGGACGGACGGTACCTCAAGTTCAATGTGGAAATTGGCAGAGGGTCCTTCAAGACGGTCTACAAGGGGCTGGACACGGAGACCACCGTGGAGGTGGCATGGTGTGAGCTGCAGACGCGGAAACTGACCAAAGCGGAGCGGCAGCGCTTCAGCGAGGAAGTGGAGATGCTGAAGAACCTGCAGCACCCGAACATCGTCCGCTTCTACGACTCCTGGAAGTCCACTCTGAAGGGACACAAATGCATCCTGCTGGTCACTGAACTTATGACCTCCGGCACCCTCAAAACTTATCTGAAGCGTTTTAAGGAGATGAAGCTGAAGCTCCTGCAGCGCTGGAGTCGTCAGATCCTGAAAGGTCTTCACTTCCTGCACACGCGTACTCCTCCCATCATCCACCGAGACCTGAAGTGCGACAACATCTTCATCACCGGACCCACGGGCAGCGTGAAGATCGGTGACCTCGGACTGGCTACGCTAAAGAGAGCATCGTTTGCTAAGAGTGTAATCGGAACCCCGGAGTTCATGGCTCCAGAGATGTACGAGGAGAAGTATGATGAGGCGGTCGATGTTTATGCGTTTGGAATGTGCATTTTGGAGATGGCTACATCAGAATACCCGTACTCTGAATGCCAGAATGCAGCACAGATCTATCGCAAAGTCACCAGCGGAATGAAACCAGACAGCTTCTACAAAGTGAAAGTGCCTGAGCTGAAGGAGATTATTGAAGGGTGTATTCGTATGAACAAAGATGAAAGGTACACCATTCAGGACCTGCTGGAGCACACCTTCTTCCAGGAGCACAATGGTGTCCACGTGGAGCTGGCGGAGGAAGACGACATGGAGAAGTCCAGTCTGAAGCTGTGGCTGCGAATGGACGACACCAAGAAGCTTCATGGGAAGTACAAGGACAACAACGCCATTGAGTTCCTGTTCGAGCTGTACAAGGACGTGCCAGAGGAAGTGGCGCAGGAAATGGTGGTGCTGGGATTTGTATGCGAAGCGGACTACAAGCTGGTAGCCAAGGCCATGCGGGACCGAGTCACGGCCATTAAGCGCCAGCGGGAAAGGCAGCGTCGGCTGGCTGAGGAGCAGAAGAAGAGGAAGCAGGAGGTGGCAATCGAGGAGGAGCTTGAACCTCCCTCGCCGAAGCCCGTTAGCCGAGCCCCCGATAGCCTAGCCTCCTCTCCTGTTCAGATCCCGCCCACTCCACCTTTTCAAGAGCGTCCTGCGGTCTCTCCTGTAAACTCCCTGGAGTATGGCATCAGCAGGGGGTTCCCACCAGAGCCAGAGGAACCAGAGGCTGACCAGCACTTCCACTTCCGCCACACCAGCTACTCCTCAGTGACCTCGGATTGCGATACAGACGGCTATCTGAGTCCCTCCAGCTTCCAAGAAGGGCTCGAGGTGACTAAGGGTAACACAAGCAGCCCTCCTGTTCCACCCAGTCCATTAGCCACGGCCACATCAGCCACGCCCACTCCACCAGTTAAGGCTCTCCGTTTTCCTTCAAGCATCGCTGTGActaacagctctgaaaaagcAGCAGTCTCAGGACCTTCTAGCCCCATCTCCTCACCTGTGGACAgCTATGCTTCAGACGTCACCTCAGGCCTGAGTGACGGCTGCGAGGGCCAATCAGAGAGGGCTGGTAAGTCAGTCGCTCGACGGACAGCAGGAAAACTCTTCAGGCGAAGAGCTCGAGCTCGTCTGCGCATCACAGGGCTGTCTGATAAGGTGGACCGTGTGGTGGAGTGCCAGCTTCAGACCCACAATGATAAGATGGTCACCTTCAAGTTTGACCTCGATGGAGACAGCCCTGAGGACATCTCCACTGTGATGgTACATAATGAGTTTATCCTTCCGTCTGAGCGAGAAGGCTTCATTCATCAAATGCGTGATGTCATCAGGCGGGCGGAGTCTCTAATGGCCAAACAGTCGGCGGGTGACCAGACCAATCACACAGCGGCTCGTCAGCCACACCTCAACAGTGCTGCAGCGATTTTAGCATCGCAGCCCAACCTCCACAGTCTGGCTCGAACACACTCCGCCTCCTCTCTGCCAGGTGAGACCTCCACACGGCACGCTGAGGACCACCTGCACCATCACTTTGATCAGCCATGCCACTTACTGTCACACCATGgagtgacactgtgtgtgtgtgtgtgtgtgtgtCTCTTCTTCATGCTTCTCCATGGTTCGGTTGGTGTTCCCCCACGTTGCGGAGGCAATTGTCTGGTTTATAACTCAGGATTTGACGGAAGAAGTCACAGTAAAAacgtcattattattattattgtaattaacaacaatttttcttcttttttctctctctctcttccaggAACCTCCCGTCCATTTCAGGGCCACCCGGCTCCGCCCTACCAGTCGGACCCCATGGCGTCCCTCTCTAAGCTTGCCCACCTGCAGCAGTATCCAATGCCCTACGTGGCCACCTCCACCCACATGCCCTTCCAGTACCCGCCCCATCCCGGCTCCCCCCAACCCAGCCATCCCTCACTCTCCGGGGTCCACAGTAACCCCACCTACTCCTTGTCGTCACCACCTTCTTCATGCTCTTCACCGGGCCCCCTCGCTCTAGACCTCCTGAGCCCAACCAGTGACCTCAACAGCCCCTTAACCTCTCCCGTCCTTCAAAACCACACGGCCAACATGTGGCCGCCGCAAACCCCTCCCCTTTTCTCTCTAGCCAATATGCTGTCCATGGCCATGAGCATGGCGCACTCTTTCATCCCTGCCCAGAGTCTACCGTCCCCCCTGATGCAGCCTCTTCCCTCTATACCCGGCTTTCCTCCTCAGTTTGCCCACCACATCCAACCACAGCCTGGGTATCCATCAGTATACGCGCCGCAGTATGCTCCGCCCATGCAGGCCGAGGGCTTCTACCAGCAGGTTGGTCCTGGGGGTCACCCGGAAGCTCCGAACTGGGAGGCCATGTATGGTTATACACAGAAGACACATTCCAGCATGCACAATCAAGCACCAATGATGCCCACGCACCTTCTGCAGATGTACGCCAACATCCTACAGGAGATGGGAGAGGGCAGACCGCCTGGACACATCGATCATCTCCCAAAAGAGTTCCCCGGCCCTCAAGGGTACACACAGACGTTCCCAATATCTTCACTGGACCAGTCAGGCCTCTATAGATCCTCCTCGTCATCCTCCTCCTCGTCATCATCTGGGTCATTGTCTTCACCCAGAGCGAGTCCAGAGAGCACAGCCTCGTCCTCAAGTCCAAGATCGCTCTCACCCCCGCCAGTGGCTCCAGAGACCAGcagcaccagcacacacacgcccagagaatccccCGTCAGCGCCGAACCAAAGTCCACAGTTACAGTCGGACGCTTCCAGGTTTCCCCCTCGAAGGAGTTCCCAACACCAGTGGACATCAGTAAAACTCCACCTGGATCCACACCTACACCTCCCGCCTCACCCGACACTCCATCCACACAAGTGCCCAGCTCTTCTGTTTGCACTTCCCATGAGAACTCTCCACAGATAGAGGGAAGAAGAGCCTCAGCGGGGAGTGAAGTCACCTGCATAAACTCTGATTTCTCTCAACACCTCCATACAGATGTTCCTCAAGACCCGTCTAGATCCTCAGCTGTAGCTACTGAGCTAAATAACTCCTTAGGGATCTTACCGCCCGTTCCTCCTCATGAAGTTTCCTCCCTCCAGGAATATCCTTCCACTCCGCCTGAGAGCACGACAGCGGTGGAAGCTGAGGAGAAACAGGAGGTGCAGCGTAGTGGTGAAGAGGAGCCGTACGAccttcaccaccaccatcagcagcagcagcagcaccatcagcagcagcagcagaagaagagggCCCGTAAGCTTGACTGTGATCAGTCTGTGATGGGGACGTCGGTGGACAGCGGGCTTTCCATCGCTCTGGATCCGGAGGGGAGTCTGTGGGACGGGATGATGGGCAGCCCTCCGTATCCCACCCCTCTCAACAACCTGTGGATGAGCTACACCCGCACCTCCTCCTACATGAGCAGCGATGAGTCAGAGAGCGAAGACGAGGAGATGTGGGacgagctgcaggagctgagagAGAAgCACCTGTGTGAGGTGCAGTCTCTGCAGGCGGTGCAGAAGCGGGAGATAGAGGAGCTGTATGAGAGGATGGGGAAAGTTCCTCCTCCCTGCATCGTGTCTCCGGCGGCCATGCTGTCCAGCCGGCAGCGTCGACTCTCTAAAGGGGGGCCTTTCCCTTCCTCTCGCAGGAACAGCCTCCAGAGACTGGACATCCTCCCAGTCACAGGGATCATAAGGAAGAACTCTCTGAGTggaggaagcagcagcagcagcagcagttcacaGGATCGACCCGCCAAAGGGGTGACCTTTGCCCCTGAACTCACCAGAATGTAAAACTACACATCCGAGCCTGTTGGCAGAACTAGATTAGACTACCTCATCCAGCAACACGACTGCTGTTCACCCACGCCCCCCAACTCCGCCCCATACCCACCCACCGCCACCGTCCTACTGAAGAAAGAGAACTTTACAGGCAGACAAGGAGACCTTCTCTACTAGCAGAAGAGCGAGAGTCAGACAGTCACGTGGTAACAGTCAACGCCCACCTTCACGACTAATCGCGGAAACATGCTGACTGTGTTGAGTTATATTAAAAACCTGCCTGTGTGTACACgtgcacacgcgcacacactcacacactgctctaaTGGATCTAAACCTGGAAGGAAAATGTGCATACAGTccaggtttggacacacctgaaaacataACAtgactaattatttatttatcaaaacGCATCACATGATTACATGTTTCAGTGGCCTTGATACAGCTTTACACAGCCTTGCCATCCATCACTGGGatacttttaatataaattctattttatttcatttcataatGTTAGAAGGAAGAACTAGTGAAATATGATCATACTCATGGGATAAAAGGACTTACATAAATATACGTCCATATATAAGCACTTTTATAATAAGCACTATTATTCTATAACTAAGCCTCctttttcaccctgttcttcaatggtcatcaactaggggtgtaacgatATGTGTATTCTTTACGAATTGTCACGGTACGGTGTCACAGTTCGGTTCACGTAAACACATGCAGAGTACATGTTACACAGGCGGTCTGTAAGTGACTTTTTGAACCAATGAAAAATTGTGCTGAAATCGTGCCCTGCTATAGggaatgaatggtcgcctgttgctttccagtgtaaacgcagggttaggcgctcgcactgtctctctctctgtctcactcgcTCTCATTTGTGCTGTCTCTtaaccactctctctcttgcgccatctctctctctctctctctactctgatatattataatacagtgcagtatttaataaaagagcttgaGCCCTGTTACCACATaccatcccaaaaaacaaaacatgattataatgaagattcattcttattatgaagttaatgaaggtgaggctatacagaatctccagcctctttattttttccaccaactgTACCGAAAACGTCCCAAACTGAGGGGTTTATACTGAAGTGTGAACcgaactgtgttttctgtatCGTTACACCCCTATCAGCAGCCTACAGGACCACATTCATATTCCAGCAGTGACAGTGAggcgtttaaaaactccagcagcactgctgtgtccgTTTCTCGTATGCAGTGCTCAGTACATACCAAAGTGGTTGAAGGCCTTGTTGAATCCGTGCCTCAGTAGATCAGAGCTGATTTAGCAttatttgtcatgtcatgattTCACACAGAcaataatgtatttatgttttaaagatGTCAATCAAACTAGGTGTGACCAAACTTTTGAGTGGTACAGTTTGTCCTGCAGTAATGAAGGCAGGTGCCCTACAGGACACAATAAGTATAATTTGCTGACTGTCCTGATTCCCCTGCTGTGGTGACGGTGCTGTCGCGTTGCCGTTGCTGTGCTGAGCTTAGTGACGCGAGAGCTGCGTGTGAGCTCTCCCTGACAGCTCACCAGTGGCTCATTAGTGTGTTCTTAGCACTTTCGCAAGCAATTTGCcttcacttacacacacaaacacacacacatacatatacatacataaacagcTGCCAGACCTGCTTATAACAGGCACTCATTTCCTCTTTGAGTGTGTGAACGACACTAGTCCACTTGCCGTGacctttttattatatattataatatttctgCTTCTAATATTTCCTTACTCTGCGCTGCAGTGATGATCAGAGCTCAGCTCATACTGTAGCCTTAatgtacagatttattttatttctttgggtttattttttatttttattaatattaatgtgaaCAGAAACTGGAGATAAGGCTCGTTTGTTGGGTCTGGGATGTACATTTATCTTTATCGTCTGTGCAATGTGTAAAATACTCATTCTACACCGCATTATAAAGCAGGTGAACTAATTCTACACATTTTCTTACACTAGAGCTACAGGAGGTGTCCGAAATAACAGAAACACCGcataaaatacaca

Function

GO: NA

KEGG:

id description
K08867 WNK, PRKWNK; WNK lysine deficient protein kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU50339 lncRNA downstream 2395 17705734 ~ 17708605 (-) True G37333
TU50307 lncRNA downstream 155078 17553572 ~ 17555922 (-) True G37309
TU50288 lncRNA downstream 216585 17488885 ~ 17494415 (-) True G37298
TU50290 lncRNA downstream 216585 17488885 ~ 17494415 (-) False G37298
TU50286 lncRNA downstream 234164 17473910 ~ 17476836 (-) True LOC103025140
TU50357 lncRNA upstream 5676 17789954 ~ 17795977 (-) False vps25
TU50502 lncRNA upstream 342256 18126534 ~ 18126807 (-) True G37443
TU50503 lncRNA upstream 342976 18127254 ~ 18127560 (-) True G37444
TU50508 lncRNA upstream 353671 18137949 ~ 18139122 (-) True G37449
TU50509 lncRNA upstream 356514 18140792 ~ 18141076 (-) True G37450
XM_007248767.3 mRNA downstream 5977 17692504 ~ 17705023 (-) False cntd1
XM_022669229.1 mRNA downstream 5979 17698430 ~ 17705021 (-) False cntd1
XM_022669440.1 mRNA downstream 21616 17534703 ~ 17689384 (-) True LOC103025753
XM_007239748.3 mRNA downstream 193290 17509960 ~ 17517710 (-) True lsm12
XM_015603206.2 mRNA downstream 206183 17500469 ~ 17504817 (-) True LOC103024821
XM_007248682.3 mRNA upstream 6115 17790393 ~ 17795988 (-) False vps25
XM_007248686.3 mRNA upstream 19456 17803734 ~ 17820280 (-) False LOC103047174
XM_007248685.3 mRNA upstream 19456 17803734 ~ 17820280 (-) True LOC103047174
XM_007248687.3 mRNA upstream 38480 17822758 ~ 17836906 (-) True maz
XM_007248689.3 mRNA upstream 55149 17839427 ~ 17872154 (-) True taok2
XR_002649888.1 other downstream 5977 17692497 ~ 17705023 (-) False cntd1
XR_002649887.1 other downstream 5977 17692498 ~ 17705023 (-) False cntd1
XR_002649886.1 other downstream 5977 17692498 ~ 17705023 (-) True cntd1
TU50318 other downstream 57215 17584050 ~ 17653785 (-) False LOC103025753
TU50265 other downstream 244976 17432972 ~ 17466024 (-) True G37290
XR_002649889.1 other upstream 5673 17789951 ~ 17795986 (-) True vps25
XR_002649891.1 other upstream 498212 18282490 ~ 18317957 (-) False LOC103047479
TU50696 other upstream 788413 18572691 ~ 18573176 (-) True G37603
TU50715 other upstream 849300 18633578 ~ 18635098 (-) True G37616
TU51149 other upstream 2033990 19818268 ~ 19825652 (-) True c4h10orf128

Expression Profile