Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002649840.1 |
| length | 663 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC111192345 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 1720811 ~ 1727257 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002649839.1 | lncRNA | downstream | 365 | 1718648 ~ 1720446 (-) | True | LOC111192344 |
| TU45161 | lncRNA | downstream | 546156 | 1174440 ~ 1174655 (-) | True | G33545 |
| TU45154 | lncRNA | downstream | 564634 | 1153432 ~ 1156177 (-) | True | G33539 |
| TU45016 | lncRNA | downstream | 799165 | 912388 ~ 921646 (-) | True | G33441 |
| TU44937 | lncRNA | downstream | 1108743 | 608407 ~ 612068 (-) | False | G33389 |
| TU45350 | lncRNA | upstream | 129711 | 1856968 ~ 1857715 (-) | True | G33690 |
| TU45353 | lncRNA | upstream | 135529 | 1862786 ~ 1863512 (-) | True | G33693 |
| TU45402 | lncRNA | upstream | 248572 | 1975829 ~ 1976108 (-) | True | G33731 |
| TU45403 | lncRNA | upstream | 249072 | 1976329 ~ 1976585 (-) | True | G33732 |
| TU45446 | lncRNA | upstream | 347078 | 2074335 ~ 2074606 (-) | True | G33759 |
| XM_022668867.1 | mRNA | downstream | 173059 | 1378988 ~ 1547752 (-) | True | dnah9 |
| XM_007257197.3 | mRNA | downstream | 548138 | 1167227 ~ 1172673 (-) | True | LOC103038911 |
| XM_007257193.3 | mRNA | downstream | 595547 | 1123216 ~ 1125264 (-) | True | mrpl58 |
| XM_015607840.2 | mRNA | downstream | 595552 | 1123216 ~ 1125259 (-) | False | mrpl58 |
| XM_022669428.1 | mRNA | downstream | 608128 | 1070117 ~ 1112683 (-) | True | LOC103032113 |
| XM_007257213.3 | mRNA | upstream | 1766 | 1729023 ~ 1741475 (-) | False | LOC103042940 |
| XM_007257212.3 | mRNA | upstream | 1766 | 1729023 ~ 1741458 (-) | True | LOC103042940 |
| XM_022668878.1 | mRNA | upstream | 17959 | 1745216 ~ 1753543 (-) | False | LOC103044468 |
| XM_015607839.2 | mRNA | upstream | 17959 | 1745216 ~ 1748043 (-) | False | LOC103044468 |
| XM_007257217.2 | mRNA | upstream | 17959 | 1745216 ~ 1748041 (-) | True | LOC103044468 |
| trnar-ccu | other | downstream | 594344 | 1126395 ~ 1126467 (-) | True | trnar-ccu |
| trnaq-cug | other | downstream | 595275 | 1125465 ~ 1125536 (-) | True | trnaq-cug |
| TU44781 | other | downstream | 1319499 | 389469 ~ 401312 (-) | True | LOC111192416 |
| TU45334 | other | upstream | 83329 | 1810586 ~ 1812622 (-) | True | G33675 |
| XR_002649841.1 | other | upstream | 295484 | 2022741 ~ 2034470 (-) | False | LOC103022010 |
| TU45452 | other | upstream | 307837 | 2035094 ~ 2042274 (-) | False | LOC103022010 |
| TU45451 | other | upstream | 308868 | 2036125 ~ 2042274 (-) | False | LOC103022010 |
| TU45542 | other | upstream | 441766 | 2169023 ~ 2177059 (-) | True | G33823 |
