Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002649903.1 |
| length | 526 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC111192405 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 15150171 ~ 15152128 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU49132 | lncRNA | upstream | 59795 | 15086356 ~ 15090376 (+) | True | G36512 |
| TU49131 | lncRNA | upstream | 66231 | 15081564 ~ 15083940 (+) | True | G36511 |
| TU49130 | lncRNA | upstream | 68826 | 15077784 ~ 15081345 (+) | True | G36510 |
| TU49129 | lncRNA | upstream | 68826 | 15079126 ~ 15081345 (+) | False | G36510 |
| TU49121 | lncRNA | upstream | 86058 | 15053042 ~ 15064113 (+) | True | G36503 |
| TU49145 | lncRNA | downstream | 24978 | 15177106 ~ 15181078 (+) | True | G36524 |
| TU49153 | lncRNA | downstream | 47694 | 15199822 ~ 15200073 (+) | True | G36532 |
| TU49220 | lncRNA | downstream | 224154 | 15376282 ~ 15379928 (+) | True | G36560 |
| TU49243 | lncRNA | downstream | 388986 | 15541114 ~ 15546201 (+) | True | G36582 |
| TU49244 | lncRNA | downstream | 388986 | 15541114 ~ 15547526 (+) | False | G36582 |
| XM_007255166.2 | mRNA | upstream | 14268 | 15134302 ~ 15135903 (+) | True | gjd3 |
| XM_007255156.3 | mRNA | upstream | 16918 | 15116824 ~ 15133253 (+) | True | top2a |
| XM_007255159.3 | mRNA | upstream | 114217 | 15032389 ~ 15035954 (+) | True | LOC103032173 |
| XM_007255160.3 | mRNA | upstream | 158872 | 14967880 ~ 14991299 (+) | False | LOC103032486 |
| XM_007255161.3 | mRNA | upstream | 158872 | 14968126 ~ 14991299 (+) | True | LOC103032486 |
| XM_007255152.3 | mRNA | downstream | 72324 | 15224452 ~ 15382711 (+) | False | LOC103030376 |
| XM_015607336.2 | mRNA | downstream | 167639 | 15319767 ~ 15383888 (+) | True | LOC103030376 |
| XM_007255155.3 | mRNA | downstream | 196504 | 15348632 ~ 15382711 (+) | False | LOC103030376 |
| XM_022669172.1 | mRNA | downstream | 240887 | 15393015 ~ 15406356 (+) | True | LOC103029630 |
| XM_007255149.3 | mRNA | downstream | 255357 | 15407485 ~ 15423095 (+) | True | LOC103029312 |
| TU49039 | other | upstream | 359338 | 14789380 ~ 14790833 (+) | True | G36439 |
| TU48945 | other | upstream | 686532 | 14463137 ~ 14463639 (+) | True | G36371 |
| TU48468 | other | upstream | 2447115 | 12702305 ~ 12703056 (+) | True | G35995 |
| TU48402 | other | upstream | 2584200 | 12551780 ~ 12565971 (+) | True | bnip3 |
| TU48418 | other | upstream | 2779209 | 12366540 ~ 12370962 (+) | True | G35967 |
| TU49230 | other | downstream | 280703 | 15432831 ~ 15440153 (+) | False | LOC103028998 |
| TU49796 | other | downstream | 1848254 | 17000382 ~ 17018884 (+) | False | sun1 |
| TU49797 | other | downstream | 1848254 | 17000382 ~ 17018884 (+) | False | sun1 |
| TU49799 | other | downstream | 1850312 | 17002440 ~ 17018884 (+) | False | sun1 |
| TU49795 | other | downstream | 2049369 | 17201497 ~ 17205033 (+) | True | phf5a |
