Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_454725.2 |
| length | 725 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 3 |
| gene id | LOC103035005 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 18532616 ~ 18534771 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU50653 | lncRNA | downstream | 83419 | 18410521 ~ 18449197 (-) | True | G37565 |
| XR_002649892.1 | lncRNA | downstream | 114322 | 18411347 ~ 18418294 (-) | True | LOC103033820 |
| TU50654 | lncRNA | downstream | 114337 | 18411349 ~ 18418279 (-) | False | LOC103033820 |
| TU50518 | lncRNA | downstream | 343172 | 18188473 ~ 18189444 (-) | True | G37459 |
| TU50517 | lncRNA | downstream | 344608 | 18187049 ~ 18188008 (-) | True | G37458 |
| TU50689 | lncRNA | upstream | 12854 | 18547625 ~ 18547908 (-) | True | G37596 |
| TU50690 | lncRNA | upstream | 13312 | 18548083 ~ 18550231 (-) | True | G37597 |
| TU50691 | lncRNA | upstream | 19578 | 18554349 ~ 18554604 (-) | True | G37598 |
| TU50693 | lncRNA | upstream | 28340 | 18563111 ~ 18563493 (-) | True | G37600 |
| TU50694 | lncRNA | upstream | 29970 | 18564741 ~ 18565071 (-) | True | G37601 |
| XM_007248735.3 | mRNA | downstream | 20531 | 18503640 ~ 18512085 (-) | True | LOC103034677 |
| XM_022669271.1 | mRNA | downstream | 34260 | 18452946 ~ 18498356 (-) | False | LOC103047794 |
| XM_022669268.1 | mRNA | downstream | 34260 | 18452946 ~ 18498356 (-) | False | LOC103047794 |
| XM_022669265.1 | mRNA | downstream | 34260 | 18452946 ~ 18498356 (-) | False | LOC103047794 |
| XM_022669264.1 | mRNA | downstream | 34260 | 18452946 ~ 18498356 (-) | False | LOC103047794 |
| XM_022669290.1 | mRNA | upstream | 528086 | 19062857 ~ 19124736 (-) | True | LOC107197613 |
| XM_022669294.1 | mRNA | upstream | 745215 | 19279986 ~ 19291010 (-) | True | LOC103043551 |
| XM_022669298.1 | mRNA | upstream | 795896 | 19330667 ~ 19340948 (-) | True | LOC111192386 |
| XM_022669301.1 | mRNA | upstream | 807258 | 19342029 ~ 19353789 (-) | False | lrrc45 |
| XM_022669300.1 | mRNA | upstream | 807258 | 19342029 ~ 19353789 (-) | False | lrrc45 |
| XR_002649891.1 | other | downstream | 214659 | 18282490 ~ 18317957 (-) | False | LOC103047479 |
| XR_002649889.1 | other | downstream | 736630 | 17789951 ~ 17795986 (-) | True | vps25 |
| XR_002649888.1 | other | downstream | 827593 | 17692497 ~ 17705023 (-) | False | cntd1 |
| TU50696 | other | upstream | 37920 | 18572691 ~ 18573176 (-) | True | G37603 |
| TU50715 | other | upstream | 98807 | 18633578 ~ 18635098 (-) | True | G37616 |
| TU51149 | other | upstream | 1283497 | 19818268 ~ 19825652 (-) | True | c4h10orf128 |
| TU51712 | other | upstream | 3338549 | 21873320 ~ 21878377 (-) | True | G38338 |
| TU52138 | other | upstream | 4930448 | 23465219 ~ 23510619 (-) | False | LOC111192393 |
