Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_455620.2 |
| length | 603 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 4 |
| gene id | LOC103038927 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 3880582 ~ 3883412 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU46051 | lncRNA | downstream | 37855 | 3840003 ~ 3842727 (-) | True | G34218 |
| TU45973 | lncRNA | downstream | 98841 | 3777900 ~ 3781741 (-) | True | G34166 |
| TU45962 | lncRNA | downstream | 151622 | 3728642 ~ 3728960 (-) | True | G34159 |
| TU45895 | lncRNA | downstream | 481469 | 3391629 ~ 3399113 (-) | True | G34101 |
| XR_002649845.1 | lncRNA | downstream | 691146 | 3107202 ~ 3189436 (-) | True | LOC111192350 |
| TU46069 | lncRNA | upstream | 19922 | 3903334 ~ 3903569 (-) | True | G34230 |
| TU46071 | lncRNA | upstream | 26877 | 3910289 ~ 3910512 (-) | True | G34232 |
| TU46077 | lncRNA | upstream | 41030 | 3924442 ~ 3924669 (-) | True | G34238 |
| TU46079 | lncRNA | upstream | 42069 | 3925481 ~ 3925690 (-) | True | G34240 |
| TU46115 | lncRNA | upstream | 119512 | 4002924 ~ 4003802 (-) | True | G34265 |
| XM_007259151.3 | mRNA | downstream | 10406 | 3861574 ~ 3870176 (-) | True | LOC103039858 |
| XM_015608398.2 | mRNA | downstream | 41025 | 3836623 ~ 3839557 (-) | True | ccdc189 |
| XM_022668923.1 | mRNA | downstream | 51219 | 3823918 ~ 3829363 (-) | False | cbx1 |
| XM_007259156.3 | mRNA | downstream | 51253 | 3823918 ~ 3829329 (-) | True | cbx1 |
| XM_007259159.3 | mRNA | downstream | 73604 | 3802912 ~ 3806978 (-) | True | LOC103042441 |
| XM_015608330.2 | mRNA | upstream | 602 | 3884014 ~ 3893352 (-) | False | LOC103038619 |
| XM_022668928.1 | mRNA | upstream | 860 | 3884272 ~ 3893361 (-) | True | LOC103038619 |
| XM_022668927.1 | mRNA | upstream | 1912 | 3885324 ~ 3893365 (-) | False | LOC103038619 |
| XM_022668926.1 | mRNA | upstream | 1912 | 3885324 ~ 3893362 (-) | False | LOC103038619 |
| XM_022668925.1 | mRNA | upstream | 1912 | 3885324 ~ 3893361 (-) | False | LOC103038619 |
| TU45989 | other | downstream | 91390 | 3783408 ~ 3789192 (-) | False | prr15l |
| TU45987 | other | downstream | 91476 | 3783125 ~ 3789106 (-) | False | prr15l |
| XR_002649848.1 | other | upstream | 1374470 | 5257882 ~ 5362485 (-) | False | tcf7l2 |
| XR_455628.3 | other | upstream | 2024562 | 5907974 ~ 5928154 (-) | False | ccdc186 |
| TU46775 | other | upstream | 2052423 | 5935835 ~ 5939400 (-) | True | G34770 |
| TU47031 | other | upstream | 2581956 | 6465368 ~ 6513701 (-) | False | LOC103026268 |
| TU47043 | other | upstream | 2653609 | 6537021 ~ 6541364 (-) | True | G34953 |
