RNA id: trnaq-cug



Basic Information


Item Value
RNA id trnaq-cug
length 72
RNA type tRNA
GC content 0.50
exon number 1
gene id trnaq-cug
representative True

Chromosome Information


Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 1125465 ~ 1125536 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


GGTTCCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCAGCGATCCGAGTTCAAATCTCGGTGGAACCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45016 lncRNA downstream 203819 912388 ~ 921646 (-) True G33441
TU44937 lncRNA downstream 513397 608407 ~ 612068 (-) False G33389
TU44934 lncRNA downstream 514802 608407 ~ 610663 (-) False G33389
TU44943 lncRNA downstream 515324 605749 ~ 610141 (-) False G33389
TU44944 lncRNA downstream 515324 605749 ~ 610141 (-) True G33389
TU45154 lncRNA upstream 27896 1153432 ~ 1156177 (-) True G33539
TU45161 lncRNA upstream 48904 1174440 ~ 1174655 (-) True G33545
XR_002649839.1 lncRNA upstream 593112 1718648 ~ 1720446 (-) True LOC111192344
XR_002649840.1 lncRNA upstream 595275 1720811 ~ 1727257 (-) True LOC111192345
TU45350 lncRNA upstream 731432 1856968 ~ 1857715 (-) True G33690
XM_007257193.3 mRNA downstream 201 1123216 ~ 1125264 (-) True mrpl58
XM_015607840.2 mRNA downstream 206 1123216 ~ 1125259 (-) False mrpl58
XM_022669428.1 mRNA downstream 12782 1070117 ~ 1112683 (-) True LOC103032113
XM_007234089.3 mRNA downstream 74298 1046542 ~ 1051167 (-) True LOC103025106
XM_007234088.3 mRNA downstream 134384 986339 ~ 991081 (-) True LOC103024569
XM_007257197.3 mRNA upstream 41691 1167227 ~ 1172673 (-) True LOC103038911
XM_022668867.1 mRNA upstream 253452 1378988 ~ 1547752 (-) True dnah9
XM_007257213.3 mRNA upstream 603487 1729023 ~ 1741475 (-) False LOC103042940
XM_007257212.3 mRNA upstream 603487 1729023 ~ 1741458 (-) True LOC103042940
XM_022668878.1 mRNA upstream 619680 1745216 ~ 1753543 (-) False LOC103044468
TU44781 other downstream 724153 389469 ~ 401312 (-) True LOC111192416
trnar-ccu other upstream 859 1126395 ~ 1126467 (-) True trnar-ccu
TU45334 other upstream 685050 1810586 ~ 1812622 (-) True G33675
XR_002649841.1 other upstream 897205 2022741 ~ 2034470 (-) False LOC103022010
TU45452 other upstream 909558 2035094 ~ 2042274 (-) False LOC103022010
TU45451 other upstream 910589 2036125 ~ 2042274 (-) False LOC103022010

Expression Profile