Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007246697.3 |
| length | 919 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 2 |
| gene id | LOC103023156 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035908.1 |
| NCBI id | CM008311.1 |
| chromosome length | 31403898 |
| location | 8540994 ~ 8543564 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0016338 | calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005923 | bicellular tight junction | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0042802 | identical protein binding | molecular_function |
| GO:0005198 | structural molecule activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU137725 | lncRNA | upstream | 1280 | 8539482 ~ 8539717 (+) | True | G101974 |
| TU137698 | lncRNA | upstream | 123376 | 8417197 ~ 8417621 (+) | True | G101954 |
| TU137692 | lncRNA | upstream | 190299 | 8350429 ~ 8350698 (+) | True | G101949 |
| XR_002650574.1 | lncRNA | upstream | 201728 | 8336457 ~ 8339269 (+) | True | LOC111193521 |
| XR_002650575.1 | lncRNA | upstream | 211100 | 8329004 ~ 8329897 (+) | True | LOC111193522 |
| TU137764 | lncRNA | downstream | 74607 | 8618171 ~ 8618392 (+) | True | G102004 |
| TU137785 | lncRNA | downstream | 162854 | 8706418 ~ 8706877 (+) | True | G102014 |
| TU137798 | lncRNA | downstream | 254181 | 8797745 ~ 8816082 (+) | False | LOC103025691 |
| TU137870 | lncRNA | downstream | 315034 | 8858598 ~ 8863829 (+) | True | G102081 |
| TU137882 | lncRNA | downstream | 370830 | 8914394 ~ 8914600 (+) | True | G102088 |
| XM_022674651.1 | mRNA | upstream | 770469 | 7709299 ~ 7770528 (+) | True | LOC103034778 |
| XM_022674652.1 | mRNA | upstream | 770469 | 7709299 ~ 7770528 (+) | False | LOC103034778 |
| XM_015605166.2 | mRNA | upstream | 770469 | 7709299 ~ 7770528 (+) | False | LOC103034778 |
| XM_007246677.3 | mRNA | upstream | 980070 | 7542340 ~ 7560927 (+) | True | LOC103044305 |
| XM_022674649.1 | mRNA | upstream | 1002363 | 7469345 ~ 7538634 (+) | False | pibf1 |
| XM_022674661.1 | mRNA | downstream | 106556 | 8650120 ~ 8664508 (+) | True | LOC103024012 |
| XM_022674662.1 | mRNA | downstream | 141340 | 8684904 ~ 8686520 (+) | True | LOC111193523 |
| XM_022674665.1 | mRNA | downstream | 254218 | 8797782 ~ 8826133 (+) | False | LOC103025691 |
| XM_022674667.1 | mRNA | downstream | 254220 | 8797784 ~ 8826133 (+) | False | LOC103025691 |
| XM_022674663.1 | mRNA | downstream | 254228 | 8797792 ~ 8836081 (+) | True | LOC103025691 |
| TU137208 | other | upstream | 1394657 | 7144802 ~ 7146340 (+) | True | G101622 |
| XR_002650572.1 | other | upstream | 1543551 | 6955319 ~ 6997446 (+) | False | LOC103032856 |
| TU136980 | other | upstream | 2254263 | 6282025 ~ 6286734 (+) | True | G101452 |
| TU136387 | other | upstream | 3449249 | 5086760 ~ 5091748 (+) | True | G100975 |
| XR_002650569.1 | other | upstream | 3895641 | 4629124 ~ 4645356 (+) | True | atg4d |
| TU137786 | other | downstream | 171275 | 8714839 ~ 8719235 (+) | True | G102015 |
| trnar-ucu_1 | other | downstream | 290276 | 8833840 ~ 8833931 (+) | True | trnar-ucu_1 |
| TU138311 | other | downstream | 1982113 | 10525677 ~ 10526160 (+) | True | G102411 |
| TU138581 | other | downstream | 2744305 | 11287869 ~ 11294815 (+) | False | map2k7 |
| TU139745 | other | downstream | 5385501 | 13929065 ~ 13935667 (+) | True | G103376 |
