RNA id: XM_022674741.1


Basic Information

Item Value
RNA id XM_022674741.1
length 1959
RNA type mRNA
GC content 0.52
exon number 4
gene id LOC103047056
representative True

Chromosome Information

Item Value
chromosome id NC_035908.1
NCBI id CM008311.1
chromosome length 31403898
location 13773430 ~ 13805229 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TTATGTACGTATACTTATACACAACCTAATATCTCTATACGCAcaaatattctctctctctctctctctctctctctgttcccgTTCTtaacccctcctcctcctctgctcTGTGAGAGTGTAAGTTGTGAGAGATgggctgctctctctctctctctctctccggcaGGGCGGCTGAAGCTGCAGCTGGTAAGTCTGTACAGTGTGTTTTCGGTGAGGAAGAGAGGGAATTAAAGAGTTATATAATGAGGACGGGATCTGTGGAAGAGACGGAAGATCCGCCAAACCGTCACATCCCTCCAGAGATCACAGAGAGACACTACTGTCCTTCTACACAGATCAACATGAGGATATAACCGATGGATGGCATCAATGCAGCGAATAGCTCTTTGAGAGCTGAGATCCTGAGTAACAGCGTGGACTCTCCTGACACCGCTCTGACCCACTCTTTACTCGAGCTCGGGGACAGCACCAGACTGCTGGGGGTTCAGGTCATCCTGATCCTGGCCTACAGCACCATCATCCTGCTGGGTGTGGTGGGGAATTCAGTGGTGATTTATGTGGTCTGCAGGTTTAAGACTCTCCGCACCGTCACCAACTTCTTCATCGCTAACCTGGCGGTGGCAGACCTGCTGGTGAACACGCTGTGCCTCCCCTTCACGCTGGCGTACACCCTGCTGGGGGAGTGGAAGTTCGGACAGGTGCTCTGCTTCACGCTGCCGTACGCGCAGGGCCTGGCTGTGCACGTGTCCACCGTCACGCTTAACGTCATCGCTCTGGACCGTCACAGATGCATCGTTTATCACCTGGAGACTCGGATGTCGAAGGACACTTGTTTTCTCATCATCGCGATCACCTGGGTGATTAGTGCCGTGCTGGCCAGCCCTCTCGCCATCTTCAGGGAGTACGGGATGGTGGAGCTCTCTCCAGGTGAATCTATTGAAGTGTGTGGAGAGAAGTGGCCGGGGAGCAGCACAGACGGTACTCTGTACTCGATCTCTATGCTGCTGCTTCAGTATGTGTTGCCGTTAGCCGTGATCTCTTTTGCCTACATCCGGATATGGAGTAAACTCCGTAACCACGTCGGCCCGGCAGAGCGCAATGACCGCCACCGTCGCCGGCGCAAGACCACTAAAATGCTGGTCACTATGGTAGTGGTGTTTGCTGTGAGTTGGCTGCCCTTCCACGCCTTCCAGCTGGCTATAGACATCGACAGCAGTGTCCTGGTGATGCGGGACTTCAGGCTTCTGTACACCGTTTTCCATATTGTGGCCATGTGCTCAACATTCGCCAACCCCATTCTGTACGGGTGGATGAATCGTAACTACCGCAGTGCCTTCATAGCCGTCTTTCGCTGCGAGCAGCGGCTTGATTCGGTGCATCCCAAGGGCCGAGACGCCGCAGCCGTCCGGAACAAGACCGTGAAGGCTCTAGAGGCTCAGGACGCTCTGGCTACTCACCTCAGTGCTACAGACGTCTGAGACCGTACTGCAGACTGAGGACTTCAGACCAGGAGCAATCAACTGGTCTTCATCTAACTGAAGTGGGGAGCTGTCTTACTCGTACTGAATATATTATACTGATATTAAAAAGGACTTTTAGTACGAAGACACCGAGGGAATTTTAAAAGAGAAAGACTGTGTGTGCTCTTCCTCTGAAAACCACTCAGCTGGTTAAAAATGGTCGTCCACTTTCACTGAAAAGGACATCTAATGATATCACACCCACTTCTGCTTATCCCAGACCTCCAGTCCCTCAGATTTATACAGTGATTGTACAGTCTTTCCTGCAGCATCATCTGGGGCACTACTGACGCAAACAGCGGTGCACTTTGGGACGGTGTTTACAGCAAATTAGCCCTCCTTCCATTCCCACATTACTGATGCACACTTACTACAGTACATATTAACAAGGGAGCACTCTGTGAGAGGACTCCAccactgaagagagagagagaga

Function

GO: NA

KEGG:

id description
K04205 NPY2R; neuropeptide Y receptor type 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU139635 lncRNA upstream 7964 13757846 ~ 13765466 (+) True G103323
XR_002650588.1 lncRNA upstream 147984 13618413 ~ 13625446 (+) False LOC111193536
XR_002650589.1 lncRNA upstream 147984 13618450 ~ 13625446 (+) False LOC111193536
XR_002650587.1 lncRNA upstream 147984 13619923 ~ 13625446 (+) False LOC111193536
TU139529 lncRNA upstream 148024 13610519 ~ 13625406 (+) True LOC111193536
TU139662 lncRNA downstream 62184 13867413 ~ 13868223 (+) True G103347
TU139669 lncRNA downstream 83678 13888907 ~ 13904855 (+) False G103349
TU139673 lncRNA downstream 83678 13888907 ~ 13910343 (+) False G103349
TU139675 lncRNA downstream 83678 13888907 ~ 13910343 (+) True G103349
TU139677 lncRNA downstream 83678 13888907 ~ 13910343 (+) False G103349
XM_022674740.1 mRNA upstream 93209 13676444 ~ 13680221 (+) True LOC103023349
XM_007242329.3 mRNA upstream 97073 13673298 ~ 13676357 (+) True LOC103023667
XM_022674739.1 mRNA upstream 107684 13630617 ~ 13665746 (+) True LOC103024001
XM_022674734.1 mRNA upstream 182446 13580127 ~ 13590984 (+) True LOC103043054
XM_022674735.1 mRNA upstream 182446 13580127 ~ 13590984 (+) False LOC103043054
XM_022674742.1 mRNA downstream 116019 13921248 ~ 13927798 (+) True eif3f
XM_022674743.1 mRNA downstream 116090 13921319 ~ 13927798 (+) False eif3f
XM_022675037.1 mRNA downstream 246575 14051804 ~ 14061543 (+) True LOC111193619
XM_022674747.1 mRNA downstream 418751 14223980 ~ 14244056 (+) True LOC103033906
XM_007241890.3 mRNA downstream 477698 14282927 ~ 14290159 (+) True LOC103031172
TU138581 other upstream 2478615 11287869 ~ 11294815 (+) False map2k7
TU138311 other upstream 3247270 10525677 ~ 10526160 (+) True G102411
trnar-ucu_1 other upstream 4939499 8833840 ~ 8833931 (+) True trnar-ucu_1
TU137786 other upstream 5054195 8714839 ~ 8719235 (+) True G102015
TU137208 other upstream 6627090 7144802 ~ 7146340 (+) True G101622
TU139745 other downstream 123836 13929065 ~ 13935667 (+) True G103376
TU139893 other downstream 455396 14260625 ~ 14261539 (+) True G103490
TU139970 other downstream 813406 14618635 ~ 14619082 (+) True G103551
TU139988 other downstream 885814 14691043 ~ 14692199 (+) True G103561
TU140510 other downstream 2645946 16451175 ~ 16458209 (+) True G104000

Expression Profile