Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022674742.1 |
| length | 952 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 8 |
| gene id | eif3f |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035908.1 |
| NCBI id | CM008311.1 |
| chromosome length | 31403898 |
| location | 13921248 ~ 13927798 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0001731 | formation of translation preinitiation complex | biological_process |
| GO:0006446 | regulation of translational initiation | biological_process |
| GO:0005852 | eukaryotic translation initiation factor 3 complex | cellular_component |
| GO:0033290 | eukaryotic 48S preinitiation complex | cellular_component |
| GO:0016282 | eukaryotic 43S preinitiation complex | cellular_component |
| GO:0003743 | translation initiation factor activity | molecular_function |
| id | description |
|---|---|
| K03249 | EIF3F; translation initiation factor 3 subunit F |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU139673 | lncRNA | upstream | 10905 | 13888907 ~ 13910343 (+) | False | G103349 |
| TU139675 | lncRNA | upstream | 10905 | 13888907 ~ 13910343 (+) | True | G103349 |
| TU139677 | lncRNA | upstream | 10905 | 13888907 ~ 13910343 (+) | False | G103349 |
| TU139682 | lncRNA | upstream | 10905 | 13888907 ~ 13910343 (+) | False | G103349 |
| TU139685 | lncRNA | upstream | 10905 | 13888907 ~ 13910343 (+) | False | G103349 |
| TU139762 | lncRNA | downstream | 96494 | 14024292 ~ 14079252 (+) | False | G103389 |
| XR_002650549.1 | lncRNA | downstream | 133871 | 14061669 ~ 14062007 (+) | True | LOC111193479 |
| TU139761 | lncRNA | downstream | 149178 | 14076976 ~ 14079252 (+) | True | G103389 |
| TU139791 | lncRNA | downstream | 191940 | 14119738 ~ 14129753 (+) | True | G103410 |
| TU139867 | lncRNA | downstream | 271239 | 14199037 ~ 14199576 (+) | True | G103464 |
| XM_022674741.1 | mRNA | upstream | 116019 | 13773430 ~ 13805229 (+) | True | LOC103047056 |
| XM_022674740.1 | mRNA | upstream | 241027 | 13676444 ~ 13680221 (+) | True | LOC103023349 |
| XM_007242329.3 | mRNA | upstream | 244891 | 13673298 ~ 13676357 (+) | True | LOC103023667 |
| XM_022674739.1 | mRNA | upstream | 255502 | 13630617 ~ 13665746 (+) | True | LOC103024001 |
| XM_022674734.1 | mRNA | upstream | 330264 | 13580127 ~ 13590984 (+) | True | LOC103043054 |
| XM_022675037.1 | mRNA | downstream | 124006 | 14051804 ~ 14061543 (+) | True | LOC111193619 |
| XM_022674747.1 | mRNA | downstream | 296182 | 14223980 ~ 14244056 (+) | True | LOC103033906 |
| XM_007241890.3 | mRNA | downstream | 355129 | 14282927 ~ 14290159 (+) | True | LOC103031172 |
| XM_022674749.1 | mRNA | downstream | 381128 | 14308926 ~ 14330415 (+) | True | LOC103031792 |
| XM_022674748.1 | mRNA | downstream | 390400 | 14318198 ~ 14330415 (+) | False | LOC103031792 |
| TU138581 | other | upstream | 2626433 | 11287869 ~ 11294815 (+) | False | map2k7 |
| TU138311 | other | upstream | 3395088 | 10525677 ~ 10526160 (+) | True | G102411 |
| trnar-ucu_1 | other | upstream | 5087317 | 8833840 ~ 8833931 (+) | True | trnar-ucu_1 |
| TU137786 | other | upstream | 5202013 | 8714839 ~ 8719235 (+) | True | G102015 |
| TU137208 | other | upstream | 6774908 | 7144802 ~ 7146340 (+) | True | G101622 |
| TU139745 | other | downstream | 1267 | 13929065 ~ 13935667 (+) | True | G103376 |
| TU139893 | other | downstream | 332827 | 14260625 ~ 14261539 (+) | True | G103490 |
| TU139970 | other | downstream | 690837 | 14618635 ~ 14619082 (+) | True | G103551 |
| TU139988 | other | downstream | 763245 | 14691043 ~ 14692199 (+) | True | G103561 |
| TU140510 | other | downstream | 2523377 | 16451175 ~ 16458209 (+) | True | G104000 |
