Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022674950.1 |
| length | 2695 |
| RNA type | mRNA |
| GC content | 0.38 |
| exon number | 10 |
| gene id | LOC111193570 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035908.1 |
| NCBI id | CM008311.1 |
| chromosome length | 31403898 |
| location | 28841179 ~ 28865225 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0016064 | immunoglobulin mediated immune response | biological_process |
| GO:0002250 | adaptive immune response | biological_process |
| GO:0002252 | immune effector process | biological_process |
| GO:0002253 | activation of immune response | biological_process |
| GO:0072376 | protein activation cascade | biological_process |
| GO:0006955 | immune response | biological_process |
| GO:0006956 | complement activation | biological_process |
| GO:0006958 | complement activation, classical pathway | biological_process |
| GO:0006959 | humoral immune response | biological_process |
| GO:0048583 | regulation of response to stimulus | biological_process |
| GO:0048584 | positive regulation of response to stimulus | biological_process |
| GO:0002682 | regulation of immune system process | biological_process |
| GO:0002684 | positive regulation of immune system process | biological_process |
| GO:0050776 | regulation of immune response | biological_process |
| GO:0050778 | positive regulation of immune response | biological_process |
| GO:0002443 | leukocyte mediated immunity | biological_process |
| GO:0002449 | lymphocyte mediated immunity | biological_process |
| GO:0002455 | humoral immune response mediated by circulating immunoglobulin | biological_process |
| GO:0002460 | adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains | biological_process |
| GO:0019724 | B cell mediated immunity | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU144326 | lncRNA | upstream | 27118 | 28809335 ~ 28814062 (+) | False | G106803 |
| XR_002650609.1 | lncRNA | upstream | 27129 | 28813405 ~ 28814051 (+) | True | LOC111193572 |
| TU144330 | lncRNA | upstream | 28248 | 28809335 ~ 28812932 (+) | False | G106803 |
| TU144297 | lncRNA | upstream | 62700 | 28778182 ~ 28778480 (+) | True | G106800 |
| TU144296 | lncRNA | upstream | 64143 | 28776546 ~ 28777037 (+) | True | G106799 |
| TU144349 | lncRNA | downstream | 88365 | 28953586 ~ 29063678 (+) | True | G106817 |
| TU144383 | lncRNA | downstream | 107511 | 28972732 ~ 28974394 (+) | True | G106838 |
| TU144366 | lncRNA | downstream | 185214 | 29050435 ~ 29052453 (+) | True | G106822 |
| TU144361 | lncRNA | downstream | 187310 | 29052531 ~ 29055183 (+) | True | G106819 |
| TU144359 | lncRNA | downstream | 192098 | 29057319 ~ 29058905 (+) | False | G106819 |
| XM_022674377.1 | mRNA | upstream | 25672 | 28811824 ~ 28815508 (+) | True | LOC111193468 |
| XM_022674952.1 | mRNA | upstream | 49189 | 28785964 ~ 28791991 (+) | True | LOC111193571 |
| XM_022674375.1 | mRNA | upstream | 117354 | 28703067 ~ 28723826 (+) | True | LOC103027743 |
| XM_022674374.1 | mRNA | upstream | 138259 | 28702012 ~ 28702921 (+) | True | LOC111193466 |
| XM_022674373.1 | mRNA | upstream | 144084 | 28692844 ~ 28697096 (+) | True | LOC111193465 |
| XM_022674378.1 | mRNA | downstream | 260652 | 29125873 ~ 29127641 (+) | True | LOC111193469 |
| XM_022674953.1 | mRNA | downstream | 283844 | 29149065 ~ 29159524 (+) | False | LOC111193573 |
| XM_022674957.1 | mRNA | downstream | 343330 | 29208551 ~ 29238624 (+) | False | LOC103024513 |
| XM_022674958.1 | mRNA | downstream | 343330 | 29208551 ~ 29237973 (+) | False | LOC103024513 |
| XM_022674956.1 | mRNA | downstream | 343331 | 29208552 ~ 29241597 (+) | True | LOC103024513 |
| TU144257 | other | upstream | 120900 | 28716602 ~ 28720280 (+) | False | LOC103027743 |
| TU144107 | other | upstream | 774197 | 28066352 ~ 28066983 (+) | True | G106673 |
| TU144092 | other | upstream | 819133 | 28014516 ~ 28022047 (+) | False | G106661 |
| TU143503 | other | upstream | 3471741 | 25361744 ~ 25369439 (+) | True | LOC111193563 |
| TU144751 | other | downstream | 915105 | 29780326 ~ 29780927 (+) | True | G107117 |
