Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022675028.1 |
| length | 987 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 4 |
| gene id | pld6 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035908.1 |
| NCBI id | CM008311.1 |
| chromosome length | 31403898 |
| location | 7285492 ~ 7289120 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0030719 | P granule organization | biological_process |
| GO:0043046 | DNA methylation involved in gamete generation | biological_process |
| GO:0007286 | spermatid development | biological_process |
| GO:0034587 | piRNA metabolic process | biological_process |
| GO:0008053 | mitochondrial fusion | biological_process |
| GO:0016042 | lipid catabolic process | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005741 | mitochondrial outer membrane | cellular_component |
| GO:0004519 | endonuclease activity | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0042803 | protein homodimerization activity | molecular_function |
| GO:0035755 | cardiolipin hydrolase activity | molecular_function |
| id | description |
|---|---|
| K16862 | PLD6; mitochondrial cardiolipin hydrolase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU137246 | lncRNA | upstream | 15349 | 7269806 ~ 7270143 (+) | True | G101656 |
| TU137224 | lncRNA | upstream | 110603 | 7174665 ~ 7174889 (+) | True | G101636 |
| TU137213 | lncRNA | upstream | 165183 | 7094547 ~ 7120309 (+) | True | G101626 |
| TU137206 | lncRNA | upstream | 165511 | 7118866 ~ 7119981 (+) | True | G101620 |
| TU137186 | lncRNA | upstream | 191422 | 6999086 ~ 7094070 (+) | True | G101609 |
| TU137267 | lncRNA | downstream | 80155 | 7369275 ~ 7369582 (+) | True | G101674 |
| TU137269 | lncRNA | downstream | 81951 | 7371071 ~ 7371397 (+) | True | G101676 |
| TU137272 | lncRNA | downstream | 89142 | 7378262 ~ 7382475 (+) | True | G101679 |
| TU137276 | lncRNA | downstream | 95731 | 7384851 ~ 7389759 (+) | False | LOC103042156 |
| TU137394 | lncRNA | downstream | 160793 | 7449913 ~ 7452365 (+) | True | G101767 |
| XM_007246664.3 | mRNA | upstream | 3653 | 7272558 ~ 7281839 (+) | True | LOC103040632 |
| XM_022674641.1 | mRNA | upstream | 88495 | 7190324 ~ 7196997 (+) | True | spp2 |
| XM_007246660.3 | mRNA | upstream | 101599 | 7176528 ~ 7183893 (+) | True | alg11 |
| XM_022674629.1 | mRNA | upstream | 288046 | 6955319 ~ 6997446 (+) | True | LOC103032856 |
| XM_022674630.1 | mRNA | upstream | 288046 | 6975936 ~ 6997446 (+) | False | LOC103032856 |
| XM_007246665.3 | mRNA | downstream | 5165 | 7294285 ~ 7318919 (+) | True | LOC103040938 |
| XM_022674644.1 | mRNA | downstream | 49047 | 7338167 ~ 7345064 (+) | True | LOC103041253 |
| XM_007246670.3 | mRNA | downstream | 95637 | 7384757 ~ 7393225 (+) | False | LOC103042156 |
| XM_007246669.3 | mRNA | downstream | 95638 | 7384758 ~ 7393225 (+) | True | LOC103042156 |
| XM_007246674.3 | mRNA | downstream | 146510 | 7435630 ~ 7443495 (+) | True | tpt1 |
| TU137208 | other | upstream | 139152 | 7144802 ~ 7146340 (+) | True | G101622 |
| XR_002650572.1 | other | upstream | 288046 | 6955319 ~ 6997446 (+) | False | LOC103032856 |
| TU136980 | other | upstream | 998758 | 6282025 ~ 6286734 (+) | True | G101452 |
| TU136387 | other | upstream | 2193744 | 5086760 ~ 5091748 (+) | True | G100975 |
| XR_002650569.1 | other | upstream | 2640136 | 4629124 ~ 4645356 (+) | True | atg4d |
| TU137786 | other | downstream | 1425719 | 8714839 ~ 8719235 (+) | True | G102015 |
| trnar-ucu_1 | other | downstream | 1544720 | 8833840 ~ 8833931 (+) | True | trnar-ucu_1 |
| TU138311 | other | downstream | 3236557 | 10525677 ~ 10526160 (+) | True | G102411 |
| TU138581 | other | downstream | 3998749 | 11287869 ~ 11294815 (+) | False | map2k7 |
| TU139745 | other | downstream | 6639945 | 13929065 ~ 13935667 (+) | True | G103376 |
