Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002650596.1 |
| length | 397 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 2 |
| gene id | LOC111193552 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035908.1 |
| NCBI id | CM008311.1 |
| chromosome length | 31403898 |
| location | 19782129 ~ 19782686 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU141693 | lncRNA | upstream | 37216 | 19743514 ~ 19744913 (+) | False | nfkbiz |
| TU141689 | lncRNA | upstream | 71315 | 19706646 ~ 19710814 (+) | False | G104891 |
| TU141690 | lncRNA | upstream | 73077 | 19706646 ~ 19709052 (+) | True | G104891 |
| TU141629 | lncRNA | upstream | 91540 | 19690100 ~ 19690589 (+) | True | G104841 |
| TU141571 | lncRNA | upstream | 221538 | 19560033 ~ 19560591 (+) | True | G104811 |
| TU141728 | lncRNA | downstream | 30697 | 19813383 ~ 19862775 (+) | True | G104921 |
| TU141731 | lncRNA | downstream | 30697 | 19813383 ~ 19862112 (+) | False | G104921 |
| TU141732 | lncRNA | downstream | 30697 | 19813383 ~ 19863419 (+) | False | G104921 |
| TU141774 | lncRNA | downstream | 164157 | 19946843 ~ 19947441 (+) | True | G104944 |
| TU141781 | lncRNA | downstream | 213893 | 19996579 ~ 20002389 (+) | False | G104950 |
| XM_007254824.3 | mRNA | upstream | 37205 | 19734226 ~ 19744924 (+) | True | nfkbiz |
| XM_007254825.3 | mRNA | upstream | 55021 | 19713576 ~ 19727108 (+) | True | cep97 |
| XM_007254827.3 | mRNA | upstream | 78707 | 19688960 ~ 19703422 (+) | True | LOC103039009 |
| XM_022674837.1 | mRNA | upstream | 97979 | 19660005 ~ 19684150 (+) | False | LOC103039332 |
| XM_022674836.1 | mRNA | upstream | 97979 | 19660103 ~ 19684150 (+) | True | LOC103039332 |
| XM_007254832.2 | mRNA | downstream | 10188 | 19792874 ~ 19798191 (+) | True | hikeshi |
| XM_007254831.3 | mRNA | downstream | 16907 | 19799593 ~ 19822020 (+) | True | ccdc81 |
| XM_022674841.1 | mRNA | downstream | 16913 | 19799599 ~ 19822019 (+) | False | ccdc81 |
| XM_007254834.3 | mRNA | downstream | 96089 | 19878775 ~ 19884491 (+) | True | prss23 |
| XM_007254841.3 | mRNA | downstream | 299196 | 20081882 ~ 20145614 (+) | False | LOC103043041 |
| TU141369 | other | upstream | 858926 | 18919060 ~ 18923203 (+) | True | G104656 |
| TU140760 | other | upstream | 2654819 | 17119847 ~ 17127310 (+) | False | LOC103031769 |
| TU140710 | other | upstream | 2888406 | 16888396 ~ 16893723 (+) | False | LOC103035065 |
| TU140514 | other | upstream | 3274352 | 16502176 ~ 16507777 (+) | False | col17a1 |
| TU140510 | other | upstream | 3323920 | 16451175 ~ 16458209 (+) | True | G104000 |
| TU142294 | other | downstream | 1206587 | 20989273 ~ 20992812 (+) | True | G105276 |
| TU142348 | other | downstream | 1236352 | 21019038 ~ 21028990 (+) | True | G105312 |
| TU142415 | other | downstream | 1544506 | 21327192 ~ 21368253 (+) | True | G105357 |
| XR_002650601.1 | other | downstream | 3027393 | 22810079 ~ 22820096 (+) | False | LOC103038624 |
| TU143216 | other | downstream | 4132949 | 23915635 ~ 23923771 (+) | True | G106017 |
