Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU222562 |
| length | 584 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G164376 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035915.1 |
| NCBI id | CM008318.1 |
| chromosome length | 35429340 |
| location | 1706881 ~ 1708641 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU222434 | lncRNA | upstream | 717368 | 989297 ~ 989513 (+) | True | G164284 |
| TU222432 | lncRNA | upstream | 754452 | 952065 ~ 952429 (+) | True | G164282 |
| TU222426 | lncRNA | upstream | 762007 | 944597 ~ 944874 (+) | True | G164276 |
| TU222402 | lncRNA | upstream | 861404 | 839881 ~ 845477 (+) | True | G164253 |
| TU222322 | lncRNA | upstream | 990163 | 702281 ~ 716718 (+) | True | G164194 |
| TU222569 | lncRNA | downstream | 51290 | 1759931 ~ 1760554 (+) | False | tspear |
| TU222579 | lncRNA | downstream | 94146 | 1802787 ~ 1838087 (+) | True | LOC103028062 |
| TU222581 | lncRNA | downstream | 94146 | 1802787 ~ 1838087 (+) | False | LOC103028062 |
| TU222597 | lncRNA | downstream | 167803 | 1876444 ~ 1877085 (+) | True | G164400 |
| TU222607 | lncRNA | downstream | 194425 | 1903066 ~ 1906873 (+) | True | G164404 |
| XM_022680044.1 | mRNA | upstream | 210501 | 1404101 ~ 1496380 (+) | True | LOC103047444 |
| XM_007230404.3 | mRNA | upstream | 956395 | 675060 ~ 750486 (+) | False | slc4a10 |
| XM_007230407.3 | mRNA | upstream | 956395 | 675061 ~ 750486 (+) | False | slc4a10 |
| XM_007230405.3 | mRNA | upstream | 956395 | 687604 ~ 750486 (+) | True | slc4a10 |
| XM_007230408.3 | mRNA | upstream | 1040077 | 660601 ~ 666804 (+) | True | tbr1 |
| XM_007233774.3 | mRNA | downstream | 10651 | 1719292 ~ 1724952 (+) | True | LOC103030276 |
| XM_022680046.1 | mRNA | downstream | 35765 | 1744406 ~ 1760560 (+) | True | tspear |
| XM_007233770.3 | mRNA | downstream | 66810 | 1775451 ~ 1783041 (+) | False | LOC103029311 |
| XM_007233772.3 | mRNA | downstream | 66810 | 1775451 ~ 1783041 (+) | False | LOC103029311 |
| XM_007233771.3 | mRNA | downstream | 66810 | 1775451 ~ 1783041 (+) | False | LOC103029311 |
| TU222476 | other | upstream | 226147 | 1478706 ~ 1480734 (+) | False | LOC103047444 |
| TU222238 | other | upstream | 1134688 | 538279 ~ 572193 (+) | True | G164126 |
| TU222588 | other | downstream | 114227 | 1822868 ~ 1834634 (+) | False | LOC103028062 |
| TU222580 | other | downstream | 126172 | 1834813 ~ 1838087 (+) | False | LOC103028062 |
| TU222840 | other | downstream | 781403 | 2490044 ~ 2492991 (+) | True | G164539 |
| TU223959 | other | downstream | 4436296 | 6144937 ~ 6145969 (+) | True | G165406 |
| TU223975 | other | downstream | 4451759 | 6160400 ~ 6237986 (+) | False | LOC111194881 |
