Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU223741 |
| length | 820 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G165276 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035915.1 |
| NCBI id | CM008318.1 |
| chromosome length | 35429340 |
| location | 5719045 ~ 5719974 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU223697 | lncRNA | upstream | 69809 | 5611312 ~ 5649236 (+) | True | G165238 |
| TU223687 | lncRNA | upstream | 133927 | 5583527 ~ 5585118 (+) | True | G165229 |
| TU223621 | lncRNA | upstream | 205752 | 5504741 ~ 5513293 (+) | True | G165176 |
| TU223600 | lncRNA | upstream | 385926 | 5332779 ~ 5333119 (+) | True | G165159 |
| TU223448 | lncRNA | upstream | 412602 | 5305742 ~ 5306443 (+) | True | G165053 |
| XR_002651321.1 | lncRNA | downstream | 24928 | 5744902 ~ 5747277 (+) | True | LOC111194877 |
| XR_002651320.1 | lncRNA | downstream | 27347 | 5747321 ~ 5762851 (+) | True | LOC111194876 |
| TU223753 | lncRNA | downstream | 30709 | 5750683 ~ 5753452 (+) | True | G165283 |
| TU223802 | lncRNA | downstream | 145492 | 5865466 ~ 5868000 (+) | True | G165316 |
| TU223811 | lncRNA | downstream | 152267 | 5872241 ~ 5931151 (+) | True | G165323 |
| XM_022679998.1 | mRNA | upstream | 80107 | 5628989 ~ 5638938 (+) | True | btla |
| XM_007253221.3 | mRNA | upstream | 281813 | 5423935 ~ 5437232 (+) | True | LOC103047200 |
| XM_022680099.1 | mRNA | upstream | 281813 | 5423935 ~ 5437232 (+) | False | LOC103047200 |
| XM_007253222.3 | mRNA | upstream | 281813 | 5423935 ~ 5437232 (+) | False | LOC103047200 |
| XM_007253224.3 | mRNA | upstream | 413936 | 5300599 ~ 5305109 (+) | True | LOC103021436 |
| XM_022680107.1 | mRNA | downstream | 81917 | 5801891 ~ 5834662 (+) | True | maats1 |
| XM_022680108.1 | mRNA | downstream | 115507 | 5835481 ~ 5862907 (+) | True | nr1i2 |
| XM_022680112.1 | mRNA | downstream | 397390 | 6117364 ~ 6123051 (+) | True | LOC107196936 |
| XM_022680114.1 | mRNA | downstream | 397390 | 6117364 ~ 6123051 (+) | False | LOC107196936 |
| XM_022680113.1 | mRNA | downstream | 397390 | 6117364 ~ 6123051 (+) | False | LOC107196936 |
| TU222840 | other | upstream | 3226054 | 2490044 ~ 2492991 (+) | True | G164539 |
| TU222580 | other | upstream | 3880958 | 1834813 ~ 1838087 (+) | False | LOC103028062 |
| TU222588 | other | upstream | 3884411 | 1822868 ~ 1834634 (+) | False | LOC103028062 |
| TU222476 | other | upstream | 4238311 | 1478706 ~ 1480734 (+) | False | LOC103047444 |
| TU222238 | other | upstream | 5146852 | 538279 ~ 572193 (+) | True | G164126 |
| TU223959 | other | downstream | 424963 | 6144937 ~ 6145969 (+) | True | G165406 |
| TU223975 | other | downstream | 440426 | 6160400 ~ 6237986 (+) | False | LOC111194881 |
| XR_002651330.1 | other | downstream | 620021 | 6339995 ~ 6345403 (+) | False | wdr4 |
| XR_002651331.1 | other | downstream | 620021 | 6339995 ~ 6345403 (+) | False | wdr4 |
| TU224375 | other | downstream | 1665159 | 7385133 ~ 7429366 (+) | False | LOC103040759 |
