Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224036 |
| length | 694 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 3 |
| gene id | G165469 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035915.1 |
| NCBI id | CM008318.1 |
| chromosome length | 35429340 |
| location | 6319319 ~ 6325758 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224008 | lncRNA | upstream | 71811 | 6247265 ~ 6247508 (+) | True | G165450 |
| TU223990 | lncRNA | upstream | 73679 | 6245251 ~ 6245640 (+) | True | G165432 |
| TU223976 | lncRNA | upstream | 75404 | 6243527 ~ 6243915 (+) | True | G165418 |
| XR_002651309.1 | lncRNA | upstream | 76103 | 6241844 ~ 6243216 (+) | True | LOC111188246 |
| TU223984 | lncRNA | upstream | 126903 | 6190802 ~ 6192416 (+) | True | G165426 |
| TU224044 | lncRNA | downstream | 22245 | 6348003 ~ 6348651 (+) | True | G165474 |
| TU224057 | lncRNA | downstream | 62944 | 6388702 ~ 6388998 (+) | True | G165484 |
| XR_002651333.1 | lncRNA | downstream | 74736 | 6400494 ~ 6408768 (+) | False | LOC111194884 |
| TU224058 | lncRNA | downstream | 80121 | 6405879 ~ 6412938 (+) | False | LOC111194884 |
| TU224059 | lncRNA | downstream | 80121 | 6405879 ~ 6409605 (+) | True | LOC111194884 |
| XM_015601225.2 | mRNA | upstream | 11991 | 6296186 ~ 6307328 (+) | True | tmprss3 |
| XM_022680652.1 | mRNA | upstream | 25551 | 6289550 ~ 6293768 (+) | True | LOC103026554 |
| XM_022680117.1 | mRNA | upstream | 119566 | 6179955 ~ 6199753 (+) | True | LOC111194881 |
| XM_022680114.1 | mRNA | upstream | 196268 | 6117364 ~ 6123051 (+) | False | LOC107196936 |
| XM_007241745.3 | mRNA | downstream | 14237 | 6339995 ~ 6345403 (+) | True | wdr4 |
| XM_007241746.3 | mRNA | downstream | 14237 | 6339995 ~ 6345403 (+) | False | wdr4 |
| XM_022680135.1 | mRNA | downstream | 302848 | 6628606 ~ 6733187 (+) | False | ccdc148 |
| XM_022680137.1 | mRNA | downstream | 302886 | 6628644 ~ 6733187 (+) | False | ccdc148 |
| XM_022680136.1 | mRNA | downstream | 304532 | 6630290 ~ 6733187 (+) | True | ccdc148 |
| TU223975 | other | upstream | 81333 | 6160400 ~ 6237986 (+) | False | LOC111194881 |
| TU223959 | other | upstream | 173350 | 6144937 ~ 6145969 (+) | True | G165406 |
| TU222840 | other | upstream | 3826328 | 2490044 ~ 2492991 (+) | True | G164539 |
| TU222580 | other | upstream | 4481232 | 1834813 ~ 1838087 (+) | False | LOC103028062 |
| TU222588 | other | upstream | 4484685 | 1822868 ~ 1834634 (+) | False | LOC103028062 |
| XR_002651330.1 | other | downstream | 14237 | 6339995 ~ 6345403 (+) | False | wdr4 |
| XR_002651331.1 | other | downstream | 14237 | 6339995 ~ 6345403 (+) | False | wdr4 |
| TU224375 | other | downstream | 1059375 | 7385133 ~ 7429366 (+) | False | LOC103040759 |
| XR_002651338.1 | other | downstream | 1703637 | 8029395 ~ 8034584 (+) | True | LOC111194887 |
| TU224843 | other | downstream | 2712484 | 9038242 ~ 9078728 (+) | False | G166015 |
