Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224058 |
| length | 795 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 5 |
| gene id | LOC111194884 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035915.1 |
| NCBI id | CM008318.1 |
| chromosome length | 35429340 |
| location | 6400494 ~ 6412938 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224057 | lncRNA | upstream | 16881 | 6388702 ~ 6388998 (+) | True | G165484 |
| TU224044 | lncRNA | upstream | 57228 | 6348003 ~ 6348651 (+) | True | G165474 |
| TU224036 | lncRNA | upstream | 80121 | 6319319 ~ 6325758 (+) | False | G165469 |
| TU224037 | lncRNA | upstream | 81830 | 6319319 ~ 6324049 (+) | True | G165469 |
| TU224008 | lncRNA | upstream | 158371 | 6247265 ~ 6247508 (+) | True | G165450 |
| TU224068 | lncRNA | downstream | 3406 | 6416344 ~ 6418249 (+) | True | G165487 |
| TU224077 | lncRNA | downstream | 30062 | 6443000 ~ 6443272 (+) | False | G165494 |
| TU224079 | lncRNA | downstream | 30062 | 6443000 ~ 6443272 (+) | True | G165494 |
| TU224096 | lncRNA | downstream | 57828 | 6470766 ~ 6471725 (+) | True | G165507 |
| TU224113 | lncRNA | downstream | 251309 | 6664247 ~ 6741801 (+) | True | G165523 |
| XM_007241745.3 | mRNA | upstream | 60476 | 6339995 ~ 6345403 (+) | True | wdr4 |
| XM_007241746.3 | mRNA | upstream | 60476 | 6339995 ~ 6345403 (+) | False | wdr4 |
| XM_015601225.2 | mRNA | upstream | 98551 | 6296186 ~ 6307328 (+) | True | tmprss3 |
| XM_022680652.1 | mRNA | upstream | 112111 | 6289550 ~ 6293768 (+) | True | LOC103026554 |
| XM_022680117.1 | mRNA | upstream | 206126 | 6179955 ~ 6199753 (+) | True | LOC111194881 |
| XM_022680135.1 | mRNA | downstream | 215668 | 6628606 ~ 6733187 (+) | False | ccdc148 |
| XM_022680137.1 | mRNA | downstream | 215706 | 6628644 ~ 6733187 (+) | False | ccdc148 |
| XM_022680136.1 | mRNA | downstream | 217352 | 6630290 ~ 6733187 (+) | True | ccdc148 |
| XM_022680141.1 | mRNA | downstream | 348413 | 6761351 ~ 6832556 (+) | True | LOC103030586 |
| XM_022680142.1 | mRNA | downstream | 348419 | 6761357 ~ 6832556 (+) | False | LOC103030586 |
| XR_002651330.1 | other | upstream | 60476 | 6339995 ~ 6345403 (+) | False | wdr4 |
| XR_002651331.1 | other | upstream | 60476 | 6339995 ~ 6345403 (+) | False | wdr4 |
| TU223975 | other | upstream | 167893 | 6160400 ~ 6237986 (+) | False | LOC111194881 |
| TU223959 | other | upstream | 259910 | 6144937 ~ 6145969 (+) | True | G165406 |
| TU222840 | other | upstream | 3912888 | 2490044 ~ 2492991 (+) | True | G164539 |
| TU224375 | other | downstream | 972195 | 7385133 ~ 7429366 (+) | False | LOC103040759 |
| XR_002651338.1 | other | downstream | 1616457 | 8029395 ~ 8034584 (+) | True | LOC111194887 |
| TU224843 | other | downstream | 2625304 | 9038242 ~ 9078728 (+) | False | G166015 |
| TU224842 | other | downstream | 2662382 | 9075320 ~ 9085850 (+) | True | G166015 |
| TU224855 | other | downstream | 2724023 | 9136961 ~ 9148559 (+) | False | LOC103024790 |
