RNA id: TU22791



Basic Information


Item Value
RNA id TU22791
length 662
RNA type TUCP
GC content 0.41
exon number 2
gene id LOC103024654
representative False

Chromosome Information


Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 6105816 ~ 6110283 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


tcatactcctctacacacacacactcctcaacGCGCGCGACTGGAGAATCCGCGGCTCGAGGGAAAGCGGGATCATGGCTGCTTACagagaATGGATTGAGTCCAAAAATTCCAGAGGCGTTGACTTTCAGTACTGTGAAGGCGAGCATGTGAGCATATCAGAGCTGAAAGAGGACCCCCGAATAGACCAGCACTACCTGAGAAAGGCCTATATTCCATATTATCCAAAATCCATTTTTCAGGTATCCAAGGTATGCCATGTGACTGGAGAGAGCGGCCTCTGGAGTATCTTCAATGATGGCGGATTCCGGAAGCCCCAGTTCTTGGATGACAGCTTGCTGTGGTGGAGCCTATCGGTGACTAAGGATGACATCGCTGATGCTGAACAGAATATCCTAAGGAAGATGTTCCCAGCAGGACATGCTGAAAACCAGCAGCCTTTCCTGGAGGATTTCACTGCCTCCCCAGCTTTTCAGAACAAGTCTCGATACGGCAACTTCCGCTTCACCTTTTCTCTAAAAGAGCTGCTGCGTCTGTACGCTGAACAGTACTGCCGTGAATCTGCTCTAGTCCTCCGTGTGTTGGACACAGCGATCTACAGCCAAGAGATTCTCTACACAGTGCTGGTGCACCCACAACACGTTAACTGCTACGACCAATAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU22774 lncRNA downstream 72003 6033217 ~ 6034903 (-) True G16865
TU22756 lncRNA downstream 254172 5852194 ~ 5852734 (-) True G16851
TU22597 lncRNA downstream 310649 5795668 ~ 5796257 (-) True G16720
TU22593 lncRNA downstream 314795 5791486 ~ 5792111 (-) True G16716
TU22523 lncRNA downstream 673405 5433289 ~ 5433501 (-) True G16667
TU22802 lncRNA upstream 80912 6191112 ~ 6191699 (-) True G16886
TU22761 lncRNA upstream 213280 6323480 ~ 6324346 (-) True G16855
TU22828 lncRNA upstream 246420 6356620 ~ 6358931 (-) True LOC111191940
TU22841 lncRNA upstream 341224 6451424 ~ 6452260 (-) True G16914
TU22842 lncRNA upstream 341224 6451424 ~ 6452260 (-) False G16914
XM_022679501.1 mRNA downstream 6562 6086752 ~ 6100344 (-) False glipr2
XM_022679489.1 mRNA downstream 98849 5797443 ~ 6008057 (-) True LOC103030569
XM_022679480.1 mRNA downstream 323907 5771220 ~ 5782999 (-) False LOC103044191
XM_022679472.1 mRNA downstream 323907 5771220 ~ 5782999 (-) True LOC103044191
XM_022679457.1 mRNA downstream 760953 5328549 ~ 5345953 (-) False steap4
XM_007229445.3 mRNA upstream 735 6110935 ~ 6116552 (-) True LOC103025292
XM_007229444.2 mRNA upstream 16086 6126286 ~ 6133554 (-) True LOC103024966
XM_007229446.3 mRNA upstream 27852 6138052 ~ 6165809 (-) True tmem67
XM_022679526.1 mRNA upstream 62597 6172797 ~ 6184314 (-) False LOC103026216
XM_022679523.1 mRNA upstream 62597 6172797 ~ 6184314 (-) True LOC103026216
TU22788 other downstream 6591 6083120 ~ 6100315 (-) True glipr2
TU22789 other downstream 6591 6083120 ~ 6100315 (-) False glipr2
TU22790 other downstream 6591 6083120 ~ 6100315 (-) False glipr2
TU22582 other downstream 406419 5697045 ~ 5700487 (-) True G16709
TU22583 other downstream 406419 5697045 ~ 5700487 (-) False G16709
TU22846 other upstream 424761 6534961 ~ 6543315 (-) False sec61b
trnat-ugu_7 other upstream 812867 6923067 ~ 6923139 (-) True trnat-ugu_7
trnat-ugu_8 other upstream 813043 6923243 ~ 6923315 (-) True trnat-ugu_8
trnat-ugu_9 other upstream 813221 6923421 ~ 6923493 (-) True trnat-ugu_9
trnat-ugu_10 other upstream 813399 6923599 ~ 6923671 (-) True trnat-ugu_10

Expression Profile