Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU22901 |
| length | 270 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G16962 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 6899211 ~ 6899480 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU22889 | lncRNA | downstream | 115980 | 6775573 ~ 6783231 (-) | True | G16951 |
| TU22875 | lncRNA | downstream | 226455 | 6670069 ~ 6672756 (-) | False | G16939 |
| TU22877 | lncRNA | downstream | 226455 | 6670069 ~ 6672756 (-) | True | G16939 |
| TU22853 | lncRNA | downstream | 253217 | 6643203 ~ 6645994 (-) | True | G16921 |
| TU22854 | lncRNA | downstream | 256124 | 6641147 ~ 6643087 (-) | True | G16922 |
| TU22904 | lncRNA | upstream | 18716 | 6918196 ~ 6918657 (-) | True | G16965 |
| TU23065 | lncRNA | upstream | 96918 | 6996398 ~ 7001156 (-) | True | G17086 |
| TU23073 | lncRNA | upstream | 112523 | 7012003 ~ 7015844 (-) | True | G17093 |
| TU23102 | lncRNA | upstream | 249097 | 7148577 ~ 7155902 (-) | True | G17117 |
| TU23106 | lncRNA | upstream | 286713 | 7186193 ~ 7186801 (-) | True | G17121 |
| XM_022679618.1 | mRNA | downstream | 2391 | 6675076 ~ 6896820 (-) | True | galnt1 |
| XM_022679620.1 | mRNA | downstream | 2391 | 6679799 ~ 6896820 (-) | False | galnt1 |
| XM_015604595.2 | mRNA | downstream | 354936 | 6534859 ~ 6544275 (-) | True | sec61b |
| XM_022679574.1 | mRNA | downstream | 487790 | 6373166 ~ 6411421 (-) | False | nr4a3 |
| XM_022679571.1 | mRNA | downstream | 487792 | 6368118 ~ 6411419 (-) | False | nr4a3 |
| XM_022679643.1 | mRNA | upstream | 118477 | 7017957 ~ 7046918 (-) | True | cdh17 |
| XM_007236504.2 | mRNA | upstream | 157952 | 7057432 ~ 7065913 (-) | True | LOC103045397 |
| XM_007236506.3 | mRNA | upstream | 176323 | 7075803 ~ 7099361 (-) | False | rad54b |
| XM_015602248.2 | mRNA | upstream | 176323 | 7075803 ~ 7098230 (-) | True | rad54b |
| XM_007236505.3 | mRNA | upstream | 190100 | 7089580 ~ 7093507 (-) | True | fsbp |
| TU22846 | other | downstream | 355896 | 6534961 ~ 6543315 (-) | False | sec61b |
| TU22791 | other | downstream | 789011 | 6106906 ~ 6110200 (-) | False | LOC103024654 |
| TU22788 | other | downstream | 798896 | 6083120 ~ 6100315 (-) | True | glipr2 |
| trnat-ugu_7 | other | upstream | 23587 | 6923067 ~ 6923139 (-) | True | trnat-ugu_7 |
| trnat-ugu_8 | other | upstream | 23763 | 6923243 ~ 6923315 (-) | True | trnat-ugu_8 |
| trnat-ugu_9 | other | upstream | 23941 | 6923421 ~ 6923493 (-) | True | trnat-ugu_9 |
| trnat-ugu_10 | other | upstream | 24119 | 6923599 ~ 6923671 (-) | True | trnat-ugu_10 |
| trnat-ugu_11 | other | upstream | 25648 | 6925128 ~ 6925200 (-) | True | trnat-ugu_11 |
