RNA id: XM_022684612.1


Basic Information

Item Value
RNA id XM_022684612.1
length 490
RNA type mRNA
GC content 0.49
exon number 4
gene id LOC103037425
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 33076624 ~ 33081862 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GGGGGCAGCAGCTCCGATGGTAAAGCTCAGCTCTGCTCCTGTTTCTCTTCAGTGTCCTTGGCTCGTCAGATTCAGCAGCAGGAGGATGAAGGCGCATCTTATGGTGTTGCAGCAGGTGGCGCGGCGGACCCTCACCACCACCGCACAGAGGCAGGTGGAGAACCAGGTCCCACAGAAGCAAAAATTGTTCCAGGCAGATAATGGGCTGCCAGTTCACTTGAAGGGTGGAGCAAGTGATGCCGTCCTGTATCGAGCCACCATGGGCCTAACTGTTATGGGAACCTTATTTGTACTGTATGAGCTGGGAAAGGCAGCACTTCCTCAGAAGAAGGAATGATTCCAATCTCCTGGATTTCTTTCTTCTGGAGTTCCATGTCTAATGTGTATGGCATATAGGGATGTATTTTCATGGAGTGTATTTATTCTTTTCATAATGGGACCAGTCTACTTGTGTGTAGTGGTGAACAATAAAGTCTGCCTCCTTTGATGA

Function

GO: NA

KEGG:

id description
K02270 COX7A; cytochrome c oxidase subunit 7a

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU31132 lncRNA upstream 181974 32894241 ~ 32894650 (+) True G23116
TU31123 lncRNA upstream 235278 32837058 ~ 32841346 (+) True LOC103042732
TU31086 lncRNA upstream 360179 32711872 ~ 32716445 (+) True G23075
TU31072 lncRNA upstream 529160 32525062 ~ 32547464 (+) True G23062
TU31062 lncRNA upstream 548900 32522014 ~ 32527724 (+) True G23057
TU31181 lncRNA downstream 1793 33083642 ~ 33169392 (+) False LOC103036694
TU31326 lncRNA downstream 90520 33172369 ~ 33172714 (+) True G23251
TU31328 lncRNA downstream 108112 33189961 ~ 33190715 (+) True G23253
TU31330 lncRNA downstream 125463 33207312 ~ 33207532 (+) True G23255
TU31370 lncRNA downstream 263963 33345812 ~ 33346060 (+) True G23282
XM_007255453.3 mRNA upstream 484 33070811 ~ 33076140 (+) True LOC103037759
XM_007255455.3 mRNA upstream 8897 33016420 ~ 33067727 (+) True filip1
XM_007255456.3 mRNA upstream 8897 33016421 ~ 33067727 (+) False filip1
XM_007255454.3 mRNA upstream 14083 33016421 ~ 33062541 (+) False filip1
XM_022684558.1 mRNA upstream 106605 32931610 ~ 32970019 (+) False kif13b
XM_022684641.1 mRNA downstream 2591 33084440 ~ 33169392 (+) True LOC103036694
XM_022684615.1 mRNA downstream 2592 33084441 ~ 33169392 (+) False LOC103036694
XM_022684629.1 mRNA downstream 2592 33084441 ~ 33169392 (+) False LOC103036694
XM_022684633.1 mRNA downstream 2592 33084441 ~ 33169392 (+) False LOC103036694
XM_022684635.1 mRNA downstream 2592 33084441 ~ 33169392 (+) False LOC103036694
XR_002651887.1 other upstream 235298 32837052 ~ 32841326 (+) False LOC103042732
TU31098 other upstream 249685 32822344 ~ 32826939 (+) True G23086
TU30785 other upstream 1581726 31494345 ~ 31494898 (+) True G22834
XR_002651820.1 other upstream 2813731 30259308 ~ 30262893 (+) True LOC111195794
TU31552 other downstream 812526 33894375 ~ 33922851 (+) False cnksr3
TU31950 other downstream 2145000 35226849 ~ 35246299 (+) False trdn
TU31951 other downstream 2145000 35226849 ~ 35249655 (+) False trdn
TU32264 other downstream 3350359 36432208 ~ 36438970 (+) False ar
TU32543 other downstream 4556589 37638438 ~ 37654878 (+) True LOC111194342

Expression Profile