RNA id: XM_022685382.1


Basic Information

Item Value
RNA id XM_022685382.1
length 1346
RNA type mRNA
GC content 0.51
exon number 8
gene id eif2b2
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 39388867 ~ 39397878 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

tactttaacttttacagaagtattttaaaatcTAGTATCTTCACTTTTATCTGAGTAACGAGTGTAAATACTGTTTGAATACATAAGCCAACACGCGTGAGCTCTCTTGAACTACATTACCCAAGATACACCGCGCGGCTGATGCAAAGGCTCTTTCTATGACAACTTCCGTAAAGTAGACCACCAGGCTGAACTGGGAGCAGTCAGACATTGGAATAATTTTGACCCGTTACTGACCCGTTCAGAGACAGGAGACATGCCGGGCGCGGATAAGGAGACGGACCTGTGTGAGCGGATCGAGGCGTTTCTGGCGGAGCTGAAGCTCGGGGACCGGGGCTCCGGGGAGACCGCCCGCAGCACCGCGGCGCTGCTGCGCAGGATCACCGCACAGGCGCGCTGGAGCAGCGCAGGTGATCTGATGGAGGTCATCCGTAAAGAAGGCAGAAGGATGACCGCTGCTCAGCCCTCAGAGACCACCGTGGGCAACATGGTTCGCCGCATCCTCAAAATTATTCGAGAGGAATATGCAAGGTCCCGTGGCAGCAGCGAGGAGGCAGATCAGCAGGAGTCTCTGCACAAGCTGCTCACGTCCGGCGGCTCCAGTGAGGAGAACTTCAGACAGCACTTCCCTCCACTCAAAGCTAACATCATTGAGGCCATCAACGAGCTGCTCACTGAGCTGGAGGGCACCACAGACAACATAGCCATGCAGGCTCTGGAGCACATCCACTCTAATGAAGTCATCATGACCATCGGCCGCTCGCGCACCGTGGAGGCTTTTCTGAAGGATGCAGCGCGCAAACGCAAATTCCACGTTATCGTAGCAGAGTGCGCTCCGTTCTGCCAGGGTCATGAGATGGCCACCAGTCTGTCTAAAGACGGAATTGAAACCACAGTGATTCCTGACGCCGCCATCTTCGCAGTGATGTCCAGAGTCAATAAGGTGATTATTGGTACGCAGACGGTTTTGGCAAATGGAGGATTGAGGGCGGTGAacggcacacacacactggcactCGCTGCCAAACACCACTCCACTCCACTCATCGTGTGCGCTCCCATGTTCAAACTCTCACCACAGtttccaAATGAAGAGGACACGTTCCACAAGTTTGTTTCACCACATGAAGTGCTTCCCTTTACTGAAGGTGAGATCCTGTCGAAGGTGAATGCTCACTGTCCCGTGTTTGATTATGTTCCGCCAGAGTTAATAACGCTGTTTATTTCCAATATTGGTGGAAACGCCCCATCTTACATCTACCGTCTGATGAGTGAACTTTACCACCCTGAAGACCACGagctgtaaaaatgtataaataaataattaaaagcatttttgttctgta

Function

GO: NA

KEGG:

id description
K03754 EIF2B2; translation initiation factor eIF-2B subunit beta

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU33338 lncRNA upstream 1392 39382242 ~ 39387475 (+) True G24772
TU33343 lncRNA upstream 40905 39347646 ~ 39347962 (+) True G24775
TU33307 lncRNA upstream 137024 39242442 ~ 39251843 (+) True G24748
TU33289 lncRNA upstream 196696 39184526 ~ 39192171 (+) True G24742
TU33292 lncRNA upstream 200533 39187780 ~ 39188334 (+) True G24743
TU33365 lncRNA downstream 7938 39405816 ~ 39408899 (+) True G24790
TU33377 lncRNA downstream 39104 39436982 ~ 39439002 (+) False G24796
TU33376 lncRNA downstream 40286 39438164 ~ 39439002 (+) True G24796
TU33396 lncRNA downstream 128608 39526486 ~ 39530263 (+) True G24815
TU33414 lncRNA downstream 223975 39621853 ~ 39626693 (+) True G24833
XM_007259866.3 mRNA upstream 20574 39365807 ~ 39368293 (+) True LOC103043278
XM_007259875.2 mRNA upstream 166631 39214181 ~ 39222236 (+) True LOC103045608
XM_007259879.3 mRNA upstream 216912 39155626 ~ 39171955 (+) True rars2
XM_007259881.3 mRNA upstream 235439 39147532 ~ 39153428 (+) True LOC103047239
XM_007259888.3 mRNA upstream 455017 38928638 ~ 38933850 (+) True gjb7
XM_007259862.3 mRNA downstream 14805 39412683 ~ 39427771 (+) True LOC103042020
XM_015608501.2 mRNA downstream 270632 39668510 ~ 39669815 (+) True LOC103032515
XM_007259846.2 mRNA downstream 296775 39694653 ~ 39697487 (+) True LOC103036628
XM_007259681.3 mRNA downstream 587267 39985145 ~ 39992197 (+) True c3h6orf58
XM_022685586.1 mRNA downstream 913063 40310941 ~ 40319844 (+) True cspp1
XR_002652014.1 other upstream 47896 39325083 ~ 39340971 (+) True LOC111196173
TU33254 other upstream 343086 39045170 ~ 39045781 (+) True G24719
TU33085 other upstream 441645 38939357 ~ 38947222 (+) False G24583
TU33086 other upstream 441645 38939357 ~ 38947222 (+) True G24583
TU33100 other upstream 461885 38925696 ~ 38926982 (+) True G24594
TU33591 other downstream 421398 39819276 ~ 39825718 (+) True G24972
TU34411 other downstream 2993762 42391640 ~ 42392938 (+) True G25601
TU34410 other downstream 2993767 42391645 ~ 42392938 (+) False G25601
XR_002652205.1 other downstream 3099899 42497777 ~ 42516557 (+) True fgfr1op
TU34713 other downstream 3962591 43360469 ~ 43363444 (+) True rps29

Expression Profile