Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU34218 |
| length | 358 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G25473 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 41717221 ~ 41717780 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU34089 | lncRNA | downstream | 171720 | 41533919 ~ 41545501 (-) | True | G25367 |
| TU34127 | lncRNA | downstream | 177603 | 41538183 ~ 41539618 (-) | True | G25400 |
| TU34094 | lncRNA | downstream | 280579 | 41436041 ~ 41436642 (-) | False | arhgap11a |
| TU34108 | lncRNA | downstream | 310434 | 41404010 ~ 41406787 (-) | True | G25381 |
| XR_002652112.1 | lncRNA | downstream | 314527 | 41402021 ~ 41402694 (-) | True | LOC111196423 |
| TU34215 | lncRNA | upstream | 1872 | 41719652 ~ 41729250 (-) | True | G25472 |
| TU34219 | lncRNA | upstream | 12051 | 41729831 ~ 41730469 (-) | True | G25474 |
| TU34239 | lncRNA | upstream | 61515 | 41779295 ~ 41779582 (-) | True | G25491 |
| TU34291 | lncRNA | upstream | 139052 | 41856832 ~ 41858649 (-) | False | LOC111196508 |
| TU34294 | lncRNA | upstream | 151244 | 41869024 ~ 41880424 (-) | True | LOC111196586 |
| XM_007235241.3 | mRNA | downstream | 85057 | 41620999 ~ 41632164 (-) | False | LOC103038827 |
| XM_007235240.2 | mRNA | downstream | 86964 | 41620999 ~ 41630257 (-) | False | LOC103038827 |
| XM_007235239.2 | mRNA | downstream | 86964 | 41620999 ~ 41630257 (-) | True | LOC103038827 |
| XM_007235251.3 | mRNA | downstream | 139961 | 41567196 ~ 41577260 (-) | True | cpsf3 |
| XM_007235254.3 | mRNA | downstream | 219111 | 41489377 ~ 41498110 (-) | True | taf1b |
| XM_007235249.3 | mRNA | upstream | 16801 | 41734581 ~ 41738023 (-) | True | LOC103041202 |
| XM_022685890.1 | mRNA | upstream | 138315 | 41856095 ~ 41865841 (-) | False | LOC111196508 |
| XM_022685893.1 | mRNA | upstream | 138929 | 41856709 ~ 41865843 (-) | False | LOC111196508 |
| XM_022685894.1 | mRNA | upstream | 138929 | 41856709 ~ 41865842 (-) | False | LOC111196508 |
| XM_022685892.1 | mRNA | upstream | 138929 | 41856709 ~ 41865842 (-) | False | LOC111196508 |
| XR_002652122.1 | other | downstream | 274727 | 41437756 ~ 41442494 (-) | False | arhgap11a |
| TU33946 | other | downstream | 498392 | 41214421 ~ 41218829 (-) | True | G25265 |
| TU33508 | other | downstream | 2259032 | 39455236 ~ 39458189 (-) | True | G24903 |
| TU33467 | other | downstream | 2370352 | 39339026 ~ 39346869 (-) | False | LOC103043888 |
| XR_002652156.1 | other | upstream | 139258 | 41857038 ~ 41865844 (-) | False | LOC111196508 |
| XR_002652157.1 | other | upstream | 139259 | 41857039 ~ 41865844 (-) | False | LOC111196508 |
| XR_002652158.1 | other | upstream | 139269 | 41857049 ~ 41865844 (-) | False | LOC111196508 |
| TU34500 | other | upstream | 999886 | 42717666 ~ 42718389 (-) | True | G25678 |
| TU34644 | other | upstream | 1381042 | 43098822 ~ 43111401 (-) | True | G25785 |
