Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU34302 |
| length | 376 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G25528 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 41956532 ~ 41956907 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002649718.1 | lncRNA | downstream | 29147 | 41924144 ~ 41927385 (-) | True | LOC111191902 |
| TU34294 | lncRNA | downstream | 76108 | 41869024 ~ 41880424 (-) | True | LOC111196586 |
| TU34291 | lncRNA | downstream | 97883 | 41856832 ~ 41858649 (-) | False | LOC111196508 |
| TU34239 | lncRNA | downstream | 176950 | 41779295 ~ 41779582 (-) | True | G25491 |
| TU34219 | lncRNA | downstream | 226063 | 41729831 ~ 41730469 (-) | True | G25474 |
| XR_002652174.1 | lncRNA | upstream | 115146 | 42072053 ~ 42076721 (-) | True | LOC111196609 |
| TU34336 | lncRNA | upstream | 238100 | 42195007 ~ 42195290 (-) | True | G25559 |
| TU34378 | lncRNA | upstream | 360638 | 42317545 ~ 42324732 (-) | True | G25578 |
| TU34382 | lncRNA | upstream | 367927 | 42324834 ~ 42326352 (-) | True | G25579 |
| TU34417 | lncRNA | upstream | 439903 | 42396810 ~ 42397036 (-) | True | G25607 |
| XM_007260834.3 | mRNA | downstream | 44756 | 41885575 ~ 41911776 (-) | False | LOC103030723 |
| XM_007260833.3 | mRNA | downstream | 44756 | 41885575 ~ 41911776 (-) | True | LOC103030723 |
| XM_022685901.1 | mRNA | downstream | 81990 | 41869127 ~ 41874542 (-) | False | LOC111196586 |
| XM_022685895.1 | mRNA | downstream | 90688 | 41857137 ~ 41865844 (-) | True | LOC111196508 |
| XM_007260835.3 | mRNA | upstream | 101923 | 42058830 ~ 42061451 (-) | True | sox11 |
| XM_007260838.3 | mRNA | upstream | 342962 | 42299869 ~ 42307990 (-) | True | allc |
| XM_022685971.1 | mRNA | upstream | 353443 | 42310350 ~ 42316742 (-) | True | rps7 |
| XM_022685958.1 | mRNA | upstream | 353443 | 42310350 ~ 42316742 (-) | False | rps7 |
| XM_022685965.1 | mRNA | upstream | 353443 | 42310350 ~ 42316742 (-) | False | rps7 |
| XR_002652156.1 | other | downstream | 90688 | 41857038 ~ 41865844 (-) | False | LOC111196508 |
| XR_002652157.1 | other | downstream | 90688 | 41857039 ~ 41865844 (-) | False | LOC111196508 |
| XR_002652158.1 | other | downstream | 90688 | 41857049 ~ 41865844 (-) | False | LOC111196508 |
| XR_002652122.1 | other | downstream | 514038 | 41437756 ~ 41442494 (-) | False | arhgap11a |
| TU33946 | other | downstream | 737703 | 41214421 ~ 41218829 (-) | True | G25265 |
| TU34500 | other | upstream | 760759 | 42717666 ~ 42718389 (-) | True | G25678 |
| TU34644 | other | upstream | 1141915 | 43098822 ~ 43111401 (-) | True | G25785 |
| TU34885 | other | upstream | 1718118 | 43675025 ~ 43678862 (-) | True | G25967 |
| TU35290 | other | upstream | 2812385 | 44769292 ~ 44799475 (-) | False | fkbp1b |
| TU35291 | other | upstream | 2812385 | 44769292 ~ 44799475 (-) | False | fkbp1b |
