Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU34702 |
| length | 890 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | G25828 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 43329527 ~ 43341729 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU34682 | lncRNA | upstream | 67428 | 43259620 ~ 43262099 (+) | False | LOC103026014 |
| TU34483 | lncRNA | upstream | 569556 | 42753358 ~ 42759971 (+) | True | G25662 |
| TU34478 | lncRNA | upstream | 600018 | 42727634 ~ 42729509 (+) | True | G25657 |
| TU34468 | lncRNA | upstream | 611138 | 42717658 ~ 42718389 (+) | True | G25647 |
| TU34471 | lncRNA | upstream | 723399 | 42605901 ~ 42606128 (+) | True | G25650 |
| TU34698 | lncRNA | downstream | 1970 | 43332574 ~ 43341729 (+) | False | G25828 |
| TU34710 | lncRNA | downstream | 20291 | 43350895 ~ 43356027 (+) | True | G25834 |
| XR_002649720.1 | lncRNA | downstream | 132996 | 43463600 ~ 43465928 (+) | True | LOC111191905 |
| TU34774 | lncRNA | downstream | 133005 | 43463609 ~ 43463819 (+) | False | LOC111191905 |
| TU34776 | lncRNA | downstream | 153491 | 43484095 ~ 43484399 (+) | True | G25888 |
| XM_015607896.2 | mRNA | upstream | 67431 | 43260453 ~ 43262096 (+) | True | LOC103026014 |
| XM_007243245.3 | mRNA | upstream | 150308 | 43172940 ~ 43179219 (+) | True | LOC103031694 |
| XM_022686282.1 | mRNA | upstream | 158292 | 43139803 ~ 43171235 (+) | False | LOC103030407 |
| XM_007230731.2 | mRNA | downstream | 29870 | 43360474 ~ 43363042 (+) | False | rps29 |
| XM_022686387.1 | mRNA | downstream | 97859 | 43428463 ~ 43458757 (+) | True | LOC103026793 |
| XM_007245322.3 | mRNA | downstream | 159719 | 43490323 ~ 43494316 (+) | True | LOC103033920 |
| XM_022686409.1 | mRNA | downstream | 344397 | 43675001 ~ 43688806 (+) | False | LOC103027693 |
| XM_022686420.1 | mRNA | downstream | 344400 | 43675004 ~ 43688806 (+) | True | LOC103027693 |
| XR_002652205.1 | other | upstream | 812970 | 42497777 ~ 42516557 (+) | True | fgfr1op |
| TU34411 | other | upstream | 936589 | 42391640 ~ 42392938 (+) | True | G25601 |
| TU34410 | other | upstream | 936589 | 42391645 ~ 42392938 (+) | False | G25601 |
| TU33591 | other | upstream | 3503809 | 39819276 ~ 39825718 (+) | True | G24972 |
| TU33356 | other | upstream | 3931698 | 39393842 ~ 39397829 (+) | False | eif2b2 |
| TU34713 | other | downstream | 29865 | 43360469 ~ 43363444 (+) | True | rps29 |
| TU34766 | other | downstream | 91167 | 43421771 ~ 43422046 (+) | True | G25879 |
| TU34767 | other | downstream | 93788 | 43424392 ~ 43424906 (+) | True | G25880 |
| TU34777 | other | downstream | 160182 | 43490786 ~ 43494315 (+) | False | LOC103033920 |
| TU35893 | other | downstream | 3197791 | 46528395 ~ 46530387 (+) | False | fau |
