RNA id: TU35832



Basic Information


Item Value
RNA id TU35832
length 201
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G26663
representative True

Chromosome Information


Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 46361718 ~ 46361918 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


AGGTCGCGGCAGCCCATAGACGACAATGTGTTCTGTGGTTTTCTAAAGGCAGATGTTTGAGAGGGGAAAGACGTTGTAGCTGCTTGCTTTGGATGTCAGCATATAAAATAAGCAAGTATTAACCATTTTGCACACAcagttcaaaagctattgaagaAAGAAATCCGAATATGCGAATATGAAACCAACTTTaccggagtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35757 lncRNA downstream 199619 46076136 ~ 46162099 (-) True G26605
TU35764 lncRNA downstream 294530 46066648 ~ 46067188 (-) True G26612
TU35706 lncRNA downstream 512126 45847617 ~ 45849592 (-) True G26564
TU35704 lncRNA downstream 516787 45843174 ~ 45844931 (-) True G26563
XR_002652433.1 lncRNA downstream 618868 45733316 ~ 45742850 (-) True LOC111197418
TU35837 lncRNA upstream 34043 46395961 ~ 46409064 (-) True G26666
TU35838 lncRNA upstream 34043 46395961 ~ 46409064 (-) False G26666
XR_002652516.1 lncRNA upstream 216369 46578287 ~ 46599431 (-) True LOC111197648
TU35951 lncRNA upstream 300201 46662119 ~ 46663963 (-) True G26751
TU35974 lncRNA upstream 743397 47105315 ~ 47106324 (-) True G26771
XM_007230704.3 mRNA downstream 892 46352209 ~ 46360826 (-) False LOC103043020
XM_022687038.1 mRNA downstream 892 46352209 ~ 46360826 (-) True LOC103043020
XM_022687006.1 mRNA downstream 24177 46329406 ~ 46337541 (-) True LOC103042705
XM_015601184.2 mRNA downstream 32608 46317964 ~ 46329110 (-) True LOC103029737
XM_022686938.1 mRNA downstream 232476 46112627 ~ 46129242 (-) False LOC103025714
XM_022678311.1 mRNA upstream 2211 46364129 ~ 46374917 (-) True LOC111194350
XM_007230708.3 mRNA upstream 25741 46387659 ~ 46395067 (-) False LOC103044046
XM_007230709.3 mRNA upstream 25741 46387659 ~ 46395067 (-) True LOC103044046
XM_022687064.1 mRNA upstream 34581 46396499 ~ 46404613 (-) True LOC107197829
XM_022687087.1 mRNA upstream 48538 46410456 ~ 46416421 (-) True actr10
TU35796 other downstream 68912 46292087 ~ 46292806 (-) True G26636
TU35737 other downstream 426096 45935153 ~ 45935622 (-) True G26588
TU35470 other downstream 924133 45436109 ~ 45437585 (-) True G26388
TU35363 other downstream 1475917 44882778 ~ 44885801 (-) True G26295
TU35356 other downstream 1491039 44867094 ~ 44870679 (-) False ubxn2a
XR_001518806.2 other upstream 65499 46427417 ~ 46435925 (-) False naa30
TU35879 other upstream 156953 46518871 ~ 46521243 (-) False G26695
TU35877 other upstream 161730 46523648 ~ 46525996 (-) True G26695
TU35943 other upstream 171777 46533695 ~ 46535753 (-) True fkbp3
TU35957 other upstream 342429 46704347 ~ 46738736 (-) True G26754

Expression Profile