RNA id: TU37134


Basic Information

Item Value
RNA id TU37134
length 242
RNA type TUCP
GC content 0.55
exon number 1
gene id G27683
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 52314025 ~ 52314266 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

aGTAATACTGAAGCCGTTTTGATGGTTTTGCACAGTGAGGGCAAACAGCCAGCCAAATGTGGAGACCAGTGGACTGACGGCCATGAGAGCCCACCCAACCTGCGGAGGGATGGGACTGATAGAGACGTAAACTCTGCCTTCCCCCGGCACAGCATAGCCGTGGACATCCGCCTTGTCTACCtgaacatcagcagctccgacaGACACGTGACCACTCAGCTTTCCATTCAGACGCTGAGACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37133 lncRNA upstream 791 52313035 ~ 52313234 (+) True G27682
TU37132 lncRNA upstream 2977 52310835 ~ 52311048 (+) True G27681
TU37131 lncRNA upstream 4087 52309727 ~ 52309938 (+) True G27680
TU37129 lncRNA upstream 9797 52303563 ~ 52304228 (+) True G27678
TU37127 lncRNA upstream 11314 52302169 ~ 52302711 (+) True G27676
TU37135 lncRNA downstream 846 52315112 ~ 52315495 (+) True G27684
TU37165 lncRNA downstream 28682 52342948 ~ 52348256 (+) True G27701
XR_002648588.1 lncRNA downstream 47739 52362005 ~ 52364172 (+) True LOC111188740
TU37186 lncRNA downstream 65590 52379856 ~ 52381005 (+) True G27716
TU37241 lncRNA downstream 214462 52528728 ~ 52531000 (+) True G27763
XM_007258974.3 mRNA upstream 225360 52083282 ~ 52088665 (+) True dsel
XM_022662389.1 mRNA upstream 619008 51586207 ~ 51695017 (+) True tmx3
XM_022662237.1 mRNA upstream 729928 51503221 ~ 51584097 (+) True dnajc13
XM_022662242.1 mRNA upstream 729928 51503221 ~ 51584097 (+) False dnajc13
XM_022662245.1 mRNA upstream 729928 51503221 ~ 51584097 (+) False dnajc13
XM_007252930.2 mRNA downstream 7726 52321992 ~ 52327802 (+) True LOC103029411
XM_007252931.3 mRNA downstream 53617 52367883 ~ 52374147 (+) True psmc6
XM_022678348.1 mRNA downstream 68679 52382945 ~ 52400818 (+) True ddhd1
XM_007252935.3 mRNA downstream 89616 52403882 ~ 52412080 (+) True LOC103030894
XM_007252934.3 mRNA downstream 89616 52403882 ~ 52412080 (+) False LOC103030894
TU36920 other upstream 1135651 51174488 ~ 51178374 (+) True G27489
TU36770 other upstream 1541864 50769885 ~ 50772161 (+) False lyrm2
TU36768 other upstream 1564088 50744907 ~ 50749937 (+) False nup43
TU36697 other upstream 1973948 50339710 ~ 50340077 (+) False moxd1
TU36609 other upstream 2865804 49447845 ~ 49448221 (+) True G27238
TU37199 other downstream 140165 52454431 ~ 52456164 (+) True G27729
trnac-gca_8 other downstream 154506 52468772 ~ 52468843 (+) True trnac-gca_8
TU37261 other downstream 445847 52760113 ~ 52765175 (+) False LOC111188765
trnah-gug other downstream 1308557 53622823 ~ 53622894 (+) True trnah-gug
trnae-uuc_2 other downstream 1308916 53623182 ~ 53623253 (+) True trnae-uuc_2

Expression Profile