Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU39408 |
| length | 254 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G29383 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 59219576 ~ 59219829 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0050877 | nervous system process | biological_process |
| GO:0050953 | sensory perception of light stimulus | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0003008 | system process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU39324 | lncRNA | upstream | 107277 | 59064473 ~ 59112299 (+) | False | mtmr9 |
| TU39325 | lncRNA | upstream | 107277 | 59064473 ~ 59112299 (+) | False | mtmr9 |
| TU39310 | lncRNA | upstream | 239879 | 58976662 ~ 58979697 (+) | True | G29304 |
| TU39299 | lncRNA | upstream | 270996 | 58935011 ~ 58948580 (+) | True | G29299 |
| XR_002649734.1 | lncRNA | upstream | 324236 | 58888723 ~ 58895340 (+) | True | LOC111191936 |
| TU39423 | lncRNA | downstream | 16667 | 59236496 ~ 59243834 (+) | True | G29388 |
| TU39424 | lncRNA | downstream | 16667 | 59236496 ~ 59243834 (+) | False | G29388 |
| TU39448 | lncRNA | downstream | 56778 | 59276607 ~ 59276837 (+) | True | G29405 |
| TU39454 | lncRNA | downstream | 92773 | 59312602 ~ 59312912 (+) | True | G29409 |
| TU39479 | lncRNA | downstream | 216331 | 59436160 ~ 59436375 (+) | True | G29432 |
| XM_007256634.3 | mRNA | upstream | 35543 | 59180645 ~ 59184033 (+) | True | sox7 |
| XM_007256633.3 | mRNA | upstream | 51078 | 59139580 ~ 59168498 (+) | True | pinx1 |
| XM_007256631.3 | mRNA | upstream | 95999 | 59115439 ~ 59123577 (+) | True | LOC103024478 |
| XM_007256630.3 | mRNA | upstream | 107261 | 59092440 ~ 59112315 (+) | True | mtmr9 |
| XM_007256625.3 | mRNA | upstream | 255913 | 58954101 ~ 58963663 (+) | True | LOC103022804 |
| XM_022678400.1 | mRNA | downstream | 1437 | 59221266 ~ 59228840 (+) | True | LOC111194375 |
| XM_022678406.1 | mRNA | downstream | 9015 | 59228844 ~ 59230388 (+) | True | LOC111194376 |
| XM_022678409.1 | mRNA | downstream | 20167 | 59239996 ~ 59243400 (+) | True | LOC111194377 |
| XM_022663760.1 | mRNA | downstream | 32144 | 59251973 ~ 59275534 (+) | False | LOC103025639 |
| XM_022663751.1 | mRNA | downstream | 43239 | 59263068 ~ 59275534 (+) | True | LOC103025639 |
| trnal-cag_8 | other | upstream | 21292 | 59198202 ~ 59198284 (+) | True | trnal-cag_8 |
| TU39139 | other | upstream | 800759 | 58417394 ~ 58418817 (+) | True | G29155 |
| TU38889 | other | upstream | 1407088 | 57809995 ~ 57812488 (+) | False | LOC103042006 |
| TU38768 | other | upstream | 1817184 | 57401925 ~ 57402392 (+) | True | G28865 |
| TU38502 | other | upstream | 2820135 | 56337180 ~ 56399441 (+) | False | sipa1l1 |
| TU39407 | other | downstream | 703 | 59220532 ~ 59221036 (+) | True | G29382 |
| TU39412 | other | downstream | 8239 | 59228068 ~ 59228699 (+) | False | LOC111194375 |
| TU39414 | other | downstream | 8482 | 59228311 ~ 59228562 (+) | False | LOC111194375 |
| TU39514 | other | downstream | 334497 | 59554326 ~ 59559752 (+) | False | atraid |
| TU39573 | other | downstream | 371160 | 59590989 ~ 59598241 (+) | False | nme6 |
