Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002649010.1 |
| length | 1248 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | LOC111190079 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 59576238 ~ 59578395 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU39568 | lncRNA | downstream | 1702 | 59574328 ~ 59574536 (-) | True | G29494 |
| TU39566 | lncRNA | downstream | 16574 | 59554331 ~ 59559664 (-) | False | G29492 |
| TU39564 | lncRNA | downstream | 16574 | 59554504 ~ 59559664 (-) | True | G29492 |
| TU39558 | lncRNA | downstream | 47564 | 59506926 ~ 59528674 (-) | False | snx17 |
| TU39557 | lncRNA | downstream | 47564 | 59507260 ~ 59528674 (-) | False | snx17 |
| TU39584 | lncRNA | upstream | 28783 | 59607175 ~ 59607846 (-) | True | G29509 |
| TU39642 | lncRNA | upstream | 273663 | 59852055 ~ 59852468 (-) | True | G29559 |
| TU39646 | lncRNA | upstream | 279674 | 59858066 ~ 59858339 (-) | True | G29563 |
| TU39706 | lncRNA | upstream | 495680 | 60074072 ~ 60091759 (-) | True | G29608 |
| TU39772 | lncRNA | upstream | 772881 | 60351273 ~ 60352884 (-) | False | LOC103035785 |
| XM_022663830.1 | mRNA | downstream | 2627 | 59562829 ~ 59573611 (-) | True | eif2b4 |
| XM_022663821.1 | mRNA | downstream | 2629 | 59562829 ~ 59573609 (-) | False | eif2b4 |
| XM_022663793.1 | mRNA | downstream | 23328 | 59507241 ~ 59552910 (-) | True | snx17 |
| XM_022663798.1 | mRNA | downstream | 23329 | 59507241 ~ 59552909 (-) | False | snx17 |
| XM_022663802.1 | mRNA | downstream | 38662 | 59507241 ~ 59537576 (-) | False | snx17 |
| XM_007256653.3 | mRNA | upstream | 21028 | 59599420 ~ 59608991 (-) | True | LOC103030505 |
| XM_015607686.2 | mRNA | upstream | 121642 | 59700034 ~ 59704083 (-) | True | LOC107197813 |
| XM_022663890.1 | mRNA | upstream | 214184 | 59792576 ~ 59830891 (-) | True | LOC103031863 |
| XM_007256657.2 | mRNA | upstream | 303748 | 59882140 ~ 60059600 (-) | True | LOC103032183 |
| XM_007256660.3 | mRNA | upstream | 519096 | 60097488 ~ 60123478 (-) | False | LOC103032801 |
| TU39539 | other | downstream | 137940 | 59437600 ~ 59438298 (-) | True | G29478 |
| TU39330 | other | downstream | 641449 | 58932963 ~ 58934789 (-) | True | G29317 |
| TU39086 | other | downstream | 1401534 | 58169321 ~ 58174704 (-) | False | LOC111189852 |
| XR_452898.2 | other | downstream | 2882113 | 56646027 ~ 56694125 (-) | False | LOC103031416 |
| TU38322 | other | downstream | 3759640 | 55815872 ~ 55816598 (-) | True | G28536 |
| TU39714 | other | upstream | 579146 | 60157538 ~ 60162024 (-) | False | LOC103034188 |
| XR_002649735.1 | other | upstream | 790654 | 60369046 ~ 60369614 (-) | True | LOC111191938 |
| XR_002649101.1 | other | upstream | 2255056 | 61833448 ~ 61887888 (-) | False | LOC103043586 |
| TU40670 | other | upstream | 3631889 | 63210281 ~ 63288108 (-) | False | fryl |
| TU40671 | other | upstream | 3631889 | 63210281 ~ 63256634 (-) | False | fryl |
