Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU42363 |
| length | 304 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G31546 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 67833423 ~ 67835048 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002649744.1 | lncRNA | downstream | 147111 | 67685366 ~ 67686312 (-) | True | LOC111191948 |
| TU42282 | lncRNA | downstream | 174338 | 67657575 ~ 67659085 (-) | True | G31482 |
| TU42279 | lncRNA | downstream | 178806 | 67654150 ~ 67654617 (-) | True | G31480 |
| TU42135 | lncRNA | downstream | 517250 | 67315844 ~ 67316173 (-) | True | G31385 |
| TU42091 | lncRNA | downstream | 629174 | 67203958 ~ 67204249 (-) | True | G31352 |
| TU42333 | lncRNA | upstream | 8236 | 67843284 ~ 67844523 (-) | True | G31523 |
| TU42336 | lncRNA | upstream | 8236 | 67843284 ~ 67889027 (-) | False | G31523 |
| TU42348 | lncRNA | upstream | 20599 | 67855647 ~ 67885433 (-) | False | arpc5 |
| TU42386 | lncRNA | upstream | 80411 | 67915459 ~ 67920354 (-) | True | G31564 |
| TU42398 | lncRNA | upstream | 97680 | 67932728 ~ 67940712 (-) | False | LOC103046133 |
| XM_007238290.3 | mRNA | downstream | 227247 | 67585111 ~ 67606176 (-) | True | LOC103030302 |
| XM_015607348.2 | mRNA | downstream | 353636 | 67434969 ~ 67479787 (-) | False | nek1 |
| XM_015607349.2 | mRNA | downstream | 353636 | 67434969 ~ 67479787 (-) | False | nek1 |
| XM_007255233.3 | mRNA | downstream | 353636 | 67434969 ~ 67479787 (-) | True | nek1 |
| XM_007255228.3 | mRNA | downstream | 417531 | 67352889 ~ 67415892 (-) | True | sh3rf1 |
| XM_007240731.2 | mRNA | upstream | 17509 | 67852557 ~ 67853773 (-) | True | LOC103045211 |
| XM_007240732.3 | mRNA | upstream | 20558 | 67855606 ~ 67862313 (-) | False | arpc5 |
| XM_007240734.3 | mRNA | upstream | 97512 | 67932560 ~ 67940713 (-) | True | LOC103046133 |
| XM_007240735.3 | mRNA | upstream | 133088 | 67968136 ~ 67972358 (-) | True | LOC103046427 |
| XM_007240737.3 | mRNA | upstream | 138177 | 67973225 ~ 67981928 (-) | True | LOC103046744 |
| trnat-agu_1 | other | downstream | 174772 | 67658579 ~ 67658651 (-) | True | trnat-agu_1 |
| trnai-aau_2 | other | downstream | 175170 | 67658181 ~ 67658253 (-) | True | trnai-aau_2 |
| trnai-aau_1 | other | downstream | 175725 | 67657626 ~ 67657698 (-) | True | trnai-aau_1 |
| trnai-aau | other | downstream | 175886 | 67657465 ~ 67657537 (-) | True | trnai-aau |
| TU42226 | other | downstream | 305086 | 67503749 ~ 67528337 (-) | True | G31437 |
| TU42346 | other | upstream | 20599 | 67855647 ~ 67862272 (-) | True | arpc5 |
| TU42459 | other | upstream | 256172 | 68091220 ~ 68091581 (-) | True | G31622 |
| TU42561 | other | upstream | 992937 | 68827985 ~ 68829020 (-) | False | fam84a |
| XR_002649364.1 | other | upstream | 1310260 | 69145308 ~ 69161904 (-) | True | sec63 |
| TU43425 | other | upstream | 3253827 | 71088875 ~ 71089461 (-) | True | G32343 |
