RNA id: TU44367



Basic Information


Item Value
RNA id TU44367
length 392
RNA type TUCP
GC content 0.39
exon number 3
gene id selp
representative False

Chromosome Information


Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 73988501 ~ 74016347 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


AGCTGTCCAGTGCTCTGAGATATCCGAGCCTCTCCACGCCACCATGCAGTGTAATCATCCTCTAGGAATCTTCAGCTATCAGTCCACCTGTGAGTTCAGCTGTCAGGAGGGATACACACTGACCAGCTCAAGCTCCAGCAAGCTGATGTGTGAAGCCACTGGACAGTGGAATGACTCAAAACCCATCTGTGAAGCTGTCCTTTGTCCAGCTCTTGAGGACCCTGCAAATGGCAGAATGACCTGCAGTGGGGAGAGGTCCAGTTATGGCAGCATCTGCAGCTTCAGCTGCAATGAAGGTTTCCAACTTAAGGGGACACCAGAAGTGAGCTGCACTGAATCTGCAGAGTGGAGTCAGGAGATGCCTTACTGTGAAGGTAAGAAGAGGATATTTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44347 lncRNA upstream 19595 73967219 ~ 73970910 (+) True G33054
TU44343 lncRNA upstream 29601 73955884 ~ 73960904 (+) True G33051
TU44334 lncRNA upstream 54620 73935146 ~ 73935885 (+) True G33043
TU44332 lncRNA upstream 56700 73933159 ~ 73933805 (+) True G33041
TU44229 lncRNA upstream 353813 73634296 ~ 73636692 (+) True G32961
XM_007245429.3 mRNA upstream 35801 73946078 ~ 73954704 (+) False scyl3
XM_007245428.3 mRNA upstream 35801 73946079 ~ 73954704 (+) True scyl3
XM_007245422.2 mRNA upstream 59137 73907862 ~ 73931368 (+) True LOC103035930
XM_007245424.2 mRNA upstream 59137 73907862 ~ 73931368 (+) False LOC103035930
XM_015604832.2 mRNA upstream 59137 73907862 ~ 73931368 (+) False LOC103035930
XM_022666494.1 mRNA downstream 7324 73999583 ~ 74004379 (+) True sell
XM_022666519.1 mRNA downstream 104920 74097179 ~ 74126080 (+) True LOC103039489
XR_002649475.1 other upstream 483518 73439056 ~ 73506987 (+) True LOC103030552
TU43802 other upstream 1393568 72595906 ~ 72596937 (+) True G32641
TU43523 other upstream 2010142 71964004 ~ 71980363 (+) False dab1
TU43257 other upstream 2820949 71167524 ~ 71169556 (+) True G32229
TU43252 other upstream 2849321 71137512 ~ 71141184 (+) True G32225

Expression Profile