Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007245350.3 |
| length | 1103 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 3 |
| gene id | LOC103042260 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 44357276 ~ 44359403 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0071222 | cellular response to lipopolysaccharide | biological_process |
| id | description |
|---|---|
| K05494 | IL17F, ML1; interleukin 17F |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU35127 | lncRNA | upstream | 33454 | 44319986 ~ 44323822 (+) | True | G26107 |
| TU35086 | lncRNA | upstream | 84772 | 44272294 ~ 44272504 (+) | True | G26088 |
| TU35026 | lncRNA | upstream | 94074 | 44256473 ~ 44263202 (+) | False | G26043 |
| TU35027 | lncRNA | upstream | 96260 | 44256473 ~ 44261016 (+) | True | G26043 |
| TU35012 | lncRNA | upstream | 154742 | 44117024 ~ 44202534 (+) | True | G26039 |
| TU35145 | lncRNA | downstream | 5189 | 44364592 ~ 44367931 (+) | True | G26121 |
| TU35148 | lncRNA | downstream | 17922 | 44377325 ~ 44377527 (+) | True | G26124 |
| TU35252 | lncRNA | downstream | 323785 | 44683188 ~ 44688403 (+) | True | G26202 |
| TU35266 | lncRNA | downstream | 376431 | 44735834 ~ 44736653 (+) | True | G26216 |
| TU35267 | lncRNA | downstream | 377764 | 44737167 ~ 44738115 (+) | True | G26217 |
| XM_007245348.3 | mRNA | upstream | 9620 | 44339246 ~ 44347656 (+) | True | LOC103041645 |
| XM_007245347.3 | mRNA | upstream | 59557 | 44281122 ~ 44297719 (+) | True | pnoc |
| XM_007245341.3 | mRNA | upstream | 103044 | 44220915 ~ 44254232 (+) | True | elp3 |
| XM_022686524.1 | mRNA | upstream | 103109 | 44219205 ~ 44254167 (+) | False | elp3 |
| XM_022686489.1 | mRNA | upstream | 161394 | 44150193 ~ 44195882 (+) | False | LOC103028637 |
| XM_022686599.1 | mRNA | downstream | 58035 | 44417438 ~ 44460259 (+) | True | cdc42bpb |
| XM_007256619.3 | mRNA | downstream | 101282 | 44460685 ~ 44471931 (+) | True | vipas39 |
| XM_007256614.3 | mRNA | downstream | 114745 | 44474148 ~ 44479904 (+) | True | LOC103046392 |
| XM_022668053.1 | mRNA | downstream | 313727 | 44673130 ~ 44693172 (+) | True | LOC111191907 |
| XM_022686638.1 | mRNA | downstream | 350970 | 44710373 ~ 44727205 (+) | True | LOC111197225 |
| TU34777 | other | upstream | 862961 | 43490786 ~ 43494315 (+) | False | LOC103033920 |
| TU34767 | other | upstream | 932370 | 43424392 ~ 43424906 (+) | True | G25880 |
| TU34766 | other | upstream | 935230 | 43421771 ~ 43422046 (+) | True | G25879 |
| TU34713 | other | upstream | 993832 | 43360469 ~ 43363444 (+) | True | rps29 |
| XR_002652205.1 | other | upstream | 1840719 | 42497777 ~ 42516557 (+) | True | fgfr1op |
| TU35893 | other | downstream | 2168992 | 46528395 ~ 46530387 (+) | False | fau |
| TU36151 | other | downstream | 3918864 | 48278267 ~ 48282874 (+) | True | G26915 |
| TU36153 | other | downstream | 3921362 | 48280765 ~ 48282874 (+) | False | G26915 |
| TU36264 | other | downstream | 4196394 | 48555797 ~ 48558740 (+) | True | G26995 |
| TU36265 | other | downstream | 4196394 | 48555797 ~ 48641905 (+) | False | G26995 |
