RNA id: XM_022684564.1


Basic Information

Item Value
RNA id XM_022684564.1
length 6833
RNA type mRNA
GC content 0.50
exon number 44
gene id kif13b
representative False

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 32931610 ~ 32970019 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TGTCCGGTTGCTAATCCTCCTCTTCCACCTGCTCGAGTCCGCAGGAGCTCCGTGGGAGTAAATGGCGAGAAGAAGCTGGAGAGGAAACAGGAATGAGGAACTCCAGGATAATCGGAGGTGTGAGTTTACTCTGACAATTGTTTACATGAGCTGTAATAATGGAGAAAGACTCCCTAATCCTGCTTCATGATACGAGAGGACAGTAGACTATGGCAGGAAACGCGTTCAGCAGTTCAGTCCGTGTGGAGTAATCAGAGAGAAAGCAATAACAAAACCATGGATGACTCTAGTGTGAATGGTTCAAATGTGAAGGTGGCTGTTCGAGTCAGACCCTTGAACAGAAGAGAGAAGGACCTGAAGACAAAATGTGTGGTGGAAATGGAGGGGAATCAGACAGtgctgcaaccagccagcagcaACCTCGGAAAGGGAGACAGTagGAGTCAACCAAAGGCATTTGCATATGATTACTGCTTCTGGTCTATGGATGAGGCAGAAACAAGCAAATTTGCAGGTCAGGAGGTGGTGTTCCAGTGCCTTGGGGAGAATCTCCTGGATAACGCATTCCAGGGCTATAATGCCTGTATATTTGCTTATGGCCAAACTGGCTCAGGGAAGTCGTATACTATGATGGGTTCGGCAGAGCAGCCTGGTCTTATCCCACGACTGTGCAGTTCTCTGTTTGAAAGGACCATCCGAgtggtgagagagggagaaagctTCACTGTGGAAGTGTCCTATATGGAGATCTACAATGAGAAGGTCCGAGACCTGCTGGACCCCAAAGGGAGTTCCCAAGCATTGCGGGTTAGAGAACACAAGGTGTTGGGTCCTTATGTTGATGGACTGTCTCGCCTGGCTGTGACCAGCTATAAGGACATTGAGTCGTTGATGTCAGAGGGGAATAAATCCCGTACCGTGGCGGCCACCAACATGAATGAGGAGAGCAGCCGCTCACATGCTGTCTTCAACCtcatcctcacacacactctccgaGACCTACAGTCTGGGACAAGTGGGGAGAAGGTGAGTAAGCTGAGCTTGGTGGACTTGGCAGGCAGTGAAAGGGCGGCTAAAACTGGAGCGGCTGGGGAGCGTCTCAAAGAGGGCAGCAACATCAACAAgtCTCTTACTACCCTAGGTCTGGTGATTTCAGCCCTGGCTGATCAGGGAGCAGGAAAGAACAAGAATAAATTTGTGCCTTACAGAGACTCTGTACTCACATGGCTGCTAAAGgaCAGTCTGGGTGGTAACAGTCGCACAGCCATGGTGGCCACGATCAGTCCAGCCGCTGATAACTATGATGAGACTCTGTCCACTCTGCGCTACGCTGATCGAGCAAAGAGCATCGTAAACCATGCGGTGGTAAACGAGGACCCGAACGCCAGGATCATCCGGGAGCTGAGGGAGGAGGTGGAGAAACTGCGGGAGCAGCTCACTGAAGCTGAGTCTATGAAGGCTCCAGAGCTGAAGGAGAGGCTGGAGGAGTCTGAGAAACTAATTAAGGAAATGACCGTCTCATGGGAGGAGAAACTCAGGAAGACTGAGGAAATTGCACAGGAGAGACAGAAGCAGCTGGAGAGTTTGGGCATTTCTCTCCAATTATCTGGTATCAGGATGGTAGAGGATAAATGCTTCCTGGTGAATCTAAACGCAGACCCTGCCCTCAACGAGCTGCTGGTCTATTACTTAAAGGATCATATGTTAGTGGGCTCATCAGATTCTCAAGACATCCAGCTGTGTGGTTTGGCCATTCAGCCCCAGCACTGCCTTATTGACATCACTCCAGATTCAAAAGTGATGCTCACACCAAAGAGAAATGCTcgTACCTGTGTGAATGGCACCCCTATTTATGCACCGGTCCAGCTTCACCATGGCGATCGCATCCTCTGGGGCAACAATCACTTCTTCAGGATTAACCTGCCGAAGTCACGGCCTCGTGTTGCAGCTGAGGCAGAGGAGGGTGGGGGGATGAAGGCTGCTCCCAGCATGGAGCAGCTGGATGTGGATCTGGACAGAGTGAGTCAGGGCTCCAGTGAGATCAGCTTTAACTACGAGTATGCCCAGACCGAAGTCATGATGAAGGCACTGGGCAGTGATGACCAGATGCAGTGTGTGCTGCAGTCTCTGGAGAGGAGACATGAAGAAGAGAAGCGTTCTGCTCTGGAGCGTCAACGGCTCCAATACGAGGAGGAGCTTCAGCGTATGCGGCAAAGCTTGGGCCCAGAGAGATCACTGCAACGGAGAAGCAGTGGGACCCCAGCTGTGACCACAACACACACCTCTGAAAGCCACCTCCGCCAAGCCAGCAATGACAGagagGCGGTGTTGACACGTAGTTTGAGAAAGCTCAGGGAGCAGATTGTCAAAGCGAACCAGCTGGCATGTGAGGCCAGCTTAATCGCAGAGGAGCTCAACAAAAAGACTGAATACAGTGTCACCCTGCAGATTCCTGCAGCCAACCTCGACGCCAACCGCAAGAGAGACACTGTGTTGGGAGAGCCTGCAATTCAGGTGAGGCGAAAAGGGAAAGGAAAGCAGATCTGGGCGATGGAGAAGATGGAGAACAGACTGGTCGACATGAAGGAGCTCTACCAGGAGTGGAAGGACTACGACGAGGACGATCCTGTCATGCGCTCCTACTTTAAGAGAGCTGACCCATTCTTTGATGAGCAGGAGAACCACAGTCTGATTGGAGTAGCGAACGTCTTCCTGGCCTGCCTTTTCTACGATGTAAAGCTACAGTACGCAGTGCCCATCATCAACCAGAAGGGGGAGgtGGCAGGGCGTCTGCATGTGGAGGCAGAAAGGGTGAGTGGGAAGCTGAAGGCAGAAGGTGGAAGAAAGGAGATTGACCACAGCCTTGAGGGAGAAACACATGAACGCAGACTGATCTGCACGATAAAGGTGTCTCATGCCACCGGGCTTCCCCAGCACCTCTCCAACTTTGTATTCTGTCAGTATCACTTTTGGGGTCAAGAGGAGCTGGTGTTTATCGCCCCGAAAATGGACCTCTCTGCCCCCTCCACTCCTAGCAGCACAGACCCCCAGTGTTTGGTTGTGTTTAACAACAGTAAGGAGATGGAGGTTTCAGTAACTGAGGATTTAATGGATTTCCTGGCCGAGGGCGCTGTGGCGATCGAGGTTTATGGCCACATACTGGCCAACCCACGCCGAAACCTGGCTCTGTGGGATCTAGGAGTAATCCAGGCCAAAACCTGCTCTCTAAGAGAGAGGTGGAGTGAGGTGATGAGGAGGCTGGAGCTGTGGGTTCAGGTTCTGGAGCTGAATGAGGGTGGAGAGTTTGTACCTGTGGAGGTTCTTCCTGCTAAAGATGTCCGTACAGGTGGGGTTTTCCAACTCAGACAGggTCAGTCTCGGCGTATCCAGGTGGAGGTGCGCTCTGTGCAGGACTCGGGTACCATGCCCCTCATGGTGGATTGTGTAGTCAGTGTGAGTGTGGGCAGCGTGGAGGTCCGTCCAGCACCAAGAGTGAGAGATGAAGAAATGGACAGCTATCAGGAGAAAGATCTGGAGCGGTTGAGAGCTCAGTGGTTGGTGGCCCTTACAAAGAGACAGGAGTACCTGGACCAGCATCTGCAGAAACTCGTCTCCAaaccagATAAGTCAGAGGATGATGTAGAGAGGGAGTCTCAGTTGTTGGAGTGTCGTTTGACGCTGACGGAGGAGAGGAACGCTGTGCTGGTGCCGTCTGCTGGCAGTGGTATCCCTGGTGCTCCTGCTCAGTGGGTTCCTGTGCCGGGAATGGAAACACACATTCCTGTCATCTTCCTGGGTCTCAGTGCTGATGATTTTTATGATGTTGGTTCGGTTCCGCTGGCTGGTTTGGACGCAGTTCTGAAtgaagaggatgatgatgatttcTTTGATCTACAGATTGTAAAGCACCATGACCGAGCGgtgaggGCTGAGGCCTCATGGGACTGCACTGTTCACGAGTGTCCTGAGCTGAGTCGTGGTGGGGGTCCAGAGCAGCGTGTGTATCTGACCGTGCGGGTGGTCATGCTCCTCAGTCATCCAGCTCAGATGAAGCTTGTCCTGCGCAAACGCATCTGCGTCAACCTTACCGCACGTCAGGGATTTGCTAAAAGCCTGCTGAAGCGGATGTCTCAGAGGAGCACCATTCCCGGCTGTGGGGTTACCTTTGAAATCGTCTCCAATATACCAGGGGACATGCAGGGTCCAGAGGACAGGGAGATGTTGGCCAGGTTGGCAGCCAGTGCAGAAAGACCAGCAGAAGACAGTGAGGCAGCTCTAGAGAAATATCTGCAGAGTGTTCTGGCTGTGGAGAATATCCTCACTCTGGACCGACTCAGACAGgaggtTGCAGTGAAAGAGCAGCTCGATAATAAAGGGAAGAAAAGTAGACGCTGTTTGAGTTCCCCCAGTATAAACAGGCTGTCTGGCAGCAGGCAAGATCTATCCCTCAACCATGAGCCTTCAGTCAGTAAAGGAGTTTGGGATAAACACCACAATATGCCTATGACACATCCATCTGTAAAAGGCACATCACATTCTGAACTGTCCCAAAGCCACAACCCAGATCCAGTTAAGGCCCTGGTGACGCCAATGCCCAAAATGCTCAAGTCCCTTTTCCCTAAAAGAGATGACAAGAAAGACCTGAACATTCCTCCACTTTCAATGCAGCAGGTGATGTTGACTGAGGAGGAGGATCCTGAGAGGGACAGAGTAGTTGTGTTTGACCTGTTTGGGGGAGGTTCAAATGTTCCCCGCATTATAATCCAGTCCGCAAGTCTTGACGAAAACCTCACTTCACCTAAACTGGATCCTGAGAAAAAATCCACTCCACAACAATTCACAGTAGAGAACATGGAGAGCGCAGTATTTTctccttcatcctcctctttgCCTGAGGCAGGAAACTCGACAACTACTGAAGCAGCATCAGACACTTACGAAAAAAACACACCTGATGTTCAGATCCCGGTTACAGAAAGCCAAACAGAAGACCTGTCTCAGTTAGTAGAGGCTCCTGCTCAGGTTCAGTCTGAGACAGAAGACTCTACTCACAGCCCAGTTAGCAGTACATCCAGCGGCTACATGTCCACCAGCATCTCTACAGCAACACTCTCAGAAACTCTCGTCTCAAACACAGACCTACAGTTCGAGTCCAGTGTAAAGGAAACTTCTGAATCCTCACACACTCCGGAGTTACTAGAAGGCAGGGATCCTTCTGTAGATGTTATCGTCACTGGAGAGCGAGGTGAAGAGGATTCTAGCTTTAGTGATAAAGAGGGACACTCTGAAAAAGCCACGATGGCTGAACAGTCAGTTAAGGGGGATAATGGCCCAATGCTTCTTGAAAACACTACGACTGTGGATACTACTTTTGCCGTGTCTGAGGAAAAAATCACTAATTTACTATCTTTAGAAAGATCTAATCTAGGACCTGCTGCAGAAGAAGCACTTCTGGCTGGATCATCACCTGTAACACAATCTTCTAACCTATCTTCTGAGACTGGATCGCCAACTGTAACCCAACCATCCAGCCAACCGGCTGCTGATAAAGAAGAAGCACTCCTGCCTGGATCATCACCTGTAACACAATCATCTAACCTACCTTCTGAGGCTGAATCGCCCACTGTAACCCAACCATCCAGCCACCCTGCTGCTGATAAAGAAGAAGCACTCCTGACTGCATCACCAGACTCAGCTCCTCATCCTGAAGACCAAGCCTCCAAACCCTTACCCCAAATAAACACTGCCAGCCCTCTACCTGCTGTAAACCACTCACCAGCAGCATCAATACAGCAACAACAGCCACTTCAACCACTAGCACCAGGTCTTGAGACCCAGAAGCCCCTGAGCTCCACTTCAAACCCCTTCAAAATCCAAAAAGTAAAGACTTCTGGCTTGAAGTCTTTCAAAGGGATCATTCATGAGGTAGAAGAAGATGAGGTTAAAGAAGCCATCGATCCGCTGTCAGGCTTGAGCGATCCTTTGGAAAAGCTGGAGATCCTGTCAGATACAGAGGAAGTCCACGAGGAAGGTCCCATTCCAGACTGGCTGAAGGAGGATGAATATGTGACTGTGGGCAGCAACAAGAACGGCACAGTGCGCTACGTTGGACCCACTGACTTCGCAGAGGGCATCTGGATTGGTGTGGAACTTGATGTCCCAGCAGGTAAAAACGACGGCTCAGTGGGCGGCCGGCATTATTTCCACTGTAACCCGGGCTATGGTGTTCTGGTGAGGCCAGACCGAGTGTCTCAAGCTTCAGGCACGACGAAACGACGGCGTCAGAAACGCAAACAGAACCTCTCGGGCTCCAGCCCCAACCTAGCAGCTCTGACTGCACTCGCTAAAGGAGAGGGATCTGGAGGAACACGCAAAGGAGAGAACAGGAAATCCTGGAACAGCTGAAAGTAGAGATTCCTGCTCTGTTTTTTTCACCACTACTTCTGGATGCTTACATGCTTCATGgataattagcattagccttattCAGAATCActacattgctgttttaatgctacgaaagacttttaaaaacaaatatataaaagcagCATAGTGTTAACTTTGTAGGACACCATGCTGCCTTGTGCTCCGGCTCTTTCCTGATGATGAATGTTTTGGTGAAATACTTCATCCTGCTGCACTgatcagtattttttatttttttattgttttactacAGAACATGTGCCTTAAAGTGTGTCTGTCTGCATCATCTATACTTGATATCTGTATTAGCTTCCTAGGACATCTCAGGGAAGGATGATGATCTTtatgattactattattattaatattgataaCAGGGACTTGTAGAATACGTTTTACTTTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU31132 lncRNA upstream 36960 32894241 ~ 32894650 (+) True G23116
TU31123 lncRNA upstream 90264 32837058 ~ 32841346 (+) True LOC103042732
TU31086 lncRNA upstream 215165 32711872 ~ 32716445 (+) True G23075
TU31072 lncRNA upstream 384146 32525062 ~ 32547464 (+) True G23062
TU31062 lncRNA upstream 403886 32522014 ~ 32527724 (+) True G23057
TU31181 lncRNA downstream 113623 33083642 ~ 33169392 (+) False LOC103036694
TU31326 lncRNA downstream 202350 33172369 ~ 33172714 (+) True G23251
TU31328 lncRNA downstream 219942 33189961 ~ 33190715 (+) True G23253
TU31330 lncRNA downstream 237293 33207312 ~ 33207532 (+) True G23255
TU31370 lncRNA downstream 375793 33345812 ~ 33346060 (+) True G23282
XM_007255470.3 mRNA upstream 41169 32854082 ~ 32890441 (+) False extl3
XM_007255471.3 mRNA upstream 41169 32864967 ~ 32890441 (+) True extl3
XM_022684492.1 mRNA upstream 239949 32591870 ~ 32691661 (+) True LOC103043556
XM_007255485.3 mRNA upstream 1101446 31824231 ~ 31830164 (+) True atp6v1d
XM_022684398.1 mRNA upstream 1115496 31803792 ~ 31816114 (+) False rbm25
XM_007255455.3 mRNA downstream 46401 33016420 ~ 33067727 (+) True filip1
XM_007255456.3 mRNA downstream 46402 33016421 ~ 33067727 (+) False filip1
XM_007255454.3 mRNA downstream 46402 33016421 ~ 33062541 (+) False filip1
XM_007255453.3 mRNA downstream 100792 33070811 ~ 33076140 (+) True LOC103037759
XM_022684612.1 mRNA downstream 106605 33076624 ~ 33081849 (+) True LOC103037425
XR_002651887.1 other upstream 90284 32837052 ~ 32841326 (+) False LOC103042732
TU31098 other upstream 104671 32822344 ~ 32826939 (+) True G23086
TU30785 other upstream 1436712 31494345 ~ 31494898 (+) True G22834
XR_002651820.1 other upstream 2668717 30259308 ~ 30262893 (+) True LOC111195794
TU31174 other downstream 106635 33076654 ~ 33081862 (+) False LOC103037425
TU31552 other downstream 924356 33894375 ~ 33922851 (+) False cnksr3
TU31950 other downstream 2256830 35226849 ~ 35246299 (+) False trdn
TU31951 other downstream 2256830 35226849 ~ 35249655 (+) False trdn
TU32264 other downstream 3462189 36432208 ~ 36438970 (+) False ar

Expression Profile