Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007259888.3 |
| length | 1087 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 4 |
| gene id | gjb7 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 38928638 ~ 38933850 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0007154 | cell communication | biological_process |
| GO:0005922 | connexin complex | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K07626 | GJB7, CX25; gap junction beta-7 protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33094 | lncRNA | upstream | 27272 | 38900986 ~ 38901366 (+) | True | G24589 |
| TU33079 | lncRNA | upstream | 41773 | 38886443 ~ 38886865 (+) | True | G24578 |
| TU33081 | lncRNA | upstream | 43919 | 38884087 ~ 38884719 (+) | True | G24580 |
| TU33080 | lncRNA | upstream | 44626 | 38883288 ~ 38884012 (+) | True | G24579 |
| TU33076 | lncRNA | upstream | 50981 | 38868734 ~ 38877657 (+) | True | G24575 |
| TU33273 | lncRNA | downstream | 197432 | 39131282 ~ 39139754 (+) | True | G24735 |
| TU33277 | lncRNA | downstream | 205445 | 39139295 ~ 39144818 (+) | False | G24735 |
| TU33282 | lncRNA | downstream | 239987 | 39173837 ~ 39175538 (+) | False | G24739 |
| TU33285 | lncRNA | downstream | 240125 | 39173975 ~ 39180117 (+) | True | G24739 |
| TU33289 | lncRNA | downstream | 250676 | 39184526 ~ 39192171 (+) | True | G24742 |
| XM_007259896.2 | mRNA | upstream | 128537 | 38747477 ~ 38800101 (+) | True | rev3l |
| XM_007259899.3 | mRNA | upstream | 186054 | 38729312 ~ 38742584 (+) | True | traf3ip2 |
| XM_022667294.1 | mRNA | upstream | 186054 | 38729327 ~ 38742584 (+) | False | traf3ip2 |
| XM_022667313.1 | mRNA | upstream | 202590 | 38721677 ~ 38726048 (+) | True | LOC111191700 |
| XM_007259902.2 | mRNA | upstream | 211203 | 38667509 ~ 38717435 (+) | False | fyn |
| XM_007259881.3 | mRNA | downstream | 213682 | 39147532 ~ 39153428 (+) | True | LOC103047239 |
| XM_007259879.3 | mRNA | downstream | 221776 | 39155626 ~ 39171955 (+) | True | rars2 |
| XM_007259875.2 | mRNA | downstream | 280331 | 39214181 ~ 39222236 (+) | True | LOC103045608 |
| XM_007259866.3 | mRNA | downstream | 431957 | 39365807 ~ 39368293 (+) | True | LOC103043278 |
| XM_022685382.1 | mRNA | downstream | 455017 | 39388867 ~ 39397878 (+) | True | eif2b2 |
| TU33100 | other | upstream | 1656 | 38925696 ~ 38926982 (+) | True | G24594 |
| XR_002649597.1 | other | upstream | 211203 | 38667509 ~ 38717435 (+) | False | fyn |
| TU33020 | other | upstream | 342360 | 38585439 ~ 38586278 (+) | True | G24534 |
| TU32915 | other | upstream | 546328 | 38359335 ~ 38382310 (+) | True | G24463 |
| TU32857 | other | upstream | 691597 | 38232593 ~ 38237041 (+) | False | G24431 |
| TU33085 | other | downstream | 5507 | 38939357 ~ 38947222 (+) | False | G24583 |
| TU33086 | other | downstream | 5507 | 38939357 ~ 38947222 (+) | True | G24583 |
| TU33254 | other | downstream | 111320 | 39045170 ~ 39045781 (+) | True | G24719 |
| XR_002652014.1 | other | downstream | 391233 | 39325083 ~ 39340971 (+) | True | LOC111196173 |
| TU33356 | other | downstream | 459992 | 39393842 ~ 39397829 (+) | False | eif2b2 |
