RNA id: XM_015607841.2


Basic Information

Item Value
RNA id XM_015607841.2
length 3933
RNA type mRNA
GC content 0.45
exon number 4
gene id naa30
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 46427417 ~ 46435925 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

AGGGGAACAAACTGTCGTAAAACCTAGCAACCGCTTCACTGCAACAATGGCGACCGCTTCAGGGCTGTTTGCCGGCAGTGAGGAGCCAGAGgagcggcggcggcggctcTGTTGGAGCCGCGGAGAGGAGCTCTGTACTGTGGAAATGCAGCTGCTCCGCCCGCGGGAGGCGCTCCGCGGCTGAGGAGCCCTTGTGAAGACCGGTGAACTCGAGCTGTGGACTGTGTCCGGCGAGATGACCGCGGTTCCGCCGGGGCCTAGCGGCGGCGCGCTGTCCGCGTCCCCGGCCAAGGTTTGCTTCTTCCCCGGGGACGGGTGCGCTCTGCCCGCGGGAGGGGACCCGCTGGAGTGGCCGCTGAAGGACCCTGGGCAGGAGCGGGAGGTGAGAGGCCGCGGCGTGGAGCGCATGTTCCCGGAGGTTCACACAAACTGTCAGGCGCTGGAGAGGCAGATAAACGGCTTAAAGTGCGCCGGGCTGACCGGGGTCGACCACAGCACTCCCGAGTCTCAGCCTAGAGCGGCCATGGAGCTCCAGGACAGCCGCGTAGGAACTCTGGACGGCCTGCACAACAACAGCTGCAGCAGGCTGTGTTTTCCTCACCACCATGCTCTCAACACGAACGGGGACAGCAGCATTCGCGACAGGCTCACTCTACCTAGAACTGAGCTCAGTCACAGCCACACGAGGCTCGAGGAAGGGGCTGTTTTGGCATGTCAGACTGATGGACCAGTGGAGCAGCTCTCCAGGTTAGACTTGAACCACTCGCCCTCCAGAGAAACGGGGCCAGCCCAGGAGATTAAATATGTGCGTTATGAGTCCGAGTTACAGATGCCTGGCATCATGAGACTCATAACCAAGGACCTGTCCGAGCCTTACTCCATATATACATACCGATACTTCATCCACAACTGGCCACAGCTCTGTTTTCTGGCTGTGGTGGATAAGGAGTGTGTGGGGGCTATTGTGTGTAAGCTAGACATGCACAAGAAGATGTTCCGGCGTGGGTACATCGCCATGCTCGCTGTGGATTCCAAACATCGTCGGAAAAGTATTGGTACTAACCTTGTGAAGAAGGCCATCTATGCTATGGTGGACGGAGACTGCGATGAGGTGGTGCTGGAAACAGAGATCACCAACAAATCTGCCCTGAAGCTGTATGAGAACTTGGGCTTCGTGAGAGACAAACGGCTCTTCAGATATTATCTCAACGGGGTGGATGCCTTGCGGCTCAAACTGTGGTTGCGCTAAGCTATGTTTCTGTCTCTTCTATTTCAACATGGTCAAGTTCAAAACAGATTCCACTACTTCTGTAAGTGTGGGCATAGATTCTCAAGGCCATATTTTTCTTTGCTGGTCAAACAAATCCAAGGACTATGGTGGTGAAGGCGTTGCTAGTGTAAAAGGTTAAAGCCCTCTTATGTGCTCACAGAGTTTTGTGGCACATTAAGAGTTAAGGCTTAGCTAAATGTAAGAGATCCAGGGGACACAGGAAGTTCTTttgaacagcagcagaaataAAGAAGTGACACAGTGAAATACTGGGCCCATGAAATTTGAGGTTAAGAGTCTGTTTATACACAGACTGAGGGACTTGAATGTTGAGTGcaggtttgtttttttgttgtgtgaACTGTGTGCTTGCTTGCTGTGAGGGTTTGCTTTAAGCAGTGTAGTGTGTAATAGTAATGTGCATATTGGTGAAGCTGATGTGTGATTTTGTGTATGGGTGGGTATGAATGTGTTGCCTGATAATCATCCTGAATCTTGCAAGCTTGCACTTGGGATTACTGAGCGTGTATCTCTGACATTACACCAGTTGAGGGCCAATTCTagataaattaactaaatgcACGAAGGTTGTAGCTATCAGATTGATCCTGATGTGATTCTCAAAGCACAAGTGGCTTCTGTTATTGCAAAAGTTGAAAGCTTACAAGATCCAGACTGGTATAAATCTGGCTGGGGATCATGTTGATTCAGAGAAAGTCTGCTTGTATGACAAGAGCATAGGAATCTCCTCTTAAATAGATGTTTTCTTTGCCTGTAAGAACTTTTTGTGTTGCAGTCAGAGGCAAATGAGCCTTGTATAGTCCTCAGCAGAACAGTTGGACCTCCCCATGTAACATGTTAGAAACATGTGAAGAACATAAACAtggcttgtttttatttttttattgtattttagttttgtttttccatacagttttttttcctttattttcacaACTTCACTATAAAAAAATGCTCCGTAGTGTTTGTGACTTGACCGCTTTGACAGCAGAAGCCTTAATATGCCTTCTCCAGTGCATACTTGAATTTCAGCAGTAAGCAGTAATTTGAAGGATACACTCAGTTCAGTAACTTCAGTGGGTGGTTCTGTTTAATGAGAAATTAAACAagtcattaaaatattatatcactTTTTTTGTAACATTCTGCAGGTCAGCTGAGTGATAGCTGTTTACTTACTAATGGAGCTGGTGTCCGTGTGCACAGCCTCAGCGCTAAATGCAAAGTGCAAAACTTGCCATTGGCTTGCCTATACAATATTAACTCTTCAGTGGGCAAACcatattttttaagattaatGAATCTTCATCTGAGACCAGTCAAATCTTTTACAAACTCCCATTTTGTGGTGCTCTCTTGACATCCATTAAGGTATGATTATTTATCTTCATGATTCTCATTGAATAAGTAAGCGGAGCTTGATTTGGTTTCACCCTGTTACTTGTGTAAGTTCATTTAAGTGTGTTACCTTCTGACATATGGGAGTTAAAAAGTTGTGAATTCAGAAAACTCTTCCTTAGCTCAGATGCAGTTGGTGTGAGCAAATGAGACACGATGCAGCTTAATGTATGCATACGTTTAGTTTTGTTCTAGAATATATGGAAAGATGTTCTATTGCACTTTGATTCAAAATGCTGCTGGTTTGTGTATCTATGTGCATGTCTGTGTGATTGTCATGTGTCTCCTGGATGCTACTAGGTGGCGTTTCACTGTGTGCTTGTGGAAGCAATCAGAGTCCAAACTGCTCTCCTGACACCAAATTGCAGTACTAAAACATGAAACCTGGGAAGAACATGGAGTTGGGGGCCAGTCACTTTGCTGTGCTGTGATGTTTgtggcccttttttttttaagttttgcatGGGTCTGTATACACATACACTGTGGTTAGTTGTTTtgttattctgaattattttgttCAGAAGCAGAGAGATTGAGTTGTGTGGAttatgtgacttttttttttttctttatggtcATAGCCATCCTTATTGAAAGCCAGGTTTCTGCTGTCTGTGATTCAACCATTTGGATCTGCCCACTCCTCAGGTGAATTCAGCCAACCTCAGAGAACATGAACAATGCATAAAGGACTATAACTGGACTGTCCTTCATCAGGAATTAAACATCAATGCAGACTGTGAAGCCTTTGAACAAAGGAAAGACACCACAGGGGCCCATGCTGTTCATTCATTGCTCTGACAAGTATTAACAAGTGAGTTATGTATATTGATTGAACTGCATTACATTTCTGTAACCCCTAAACACTGATAGGAATAGGAAATGGGATTTACTGGGATTTCTTGGTGCTTCCCTCAAGAAAACAGTATTATTCCTGGAGGTGTGAAAGGTACCTGACAGTATGTTTTCCAGCCTCTGGTCTACTAGAGCAGTAAGAGTTGGTATAAAGAAGCACGCTTCTATATATTCTTAATGCAAATGGTTGTCTATGGATGCAGAACTGTTTGGTTTCTCATTCTATATTTTGTTTGGTGAAGGGTTCAGAGTGAAGTTTTGCATGTCATTTTTAGGAAGTTTCTCCTGCCCTGTTTGAATTTCATTTAGATctaaaaacattacaatatCTTTTATTTAATGTGGATAGAAAAAAGCCtcagaaataaattatttgattttttcaA

Function

GO: NA

KEGG:

id description
K00670 NAA30, MAK3; N-alpha-acetyltransferase 30

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35837 lncRNA downstream 21413 46395961 ~ 46409064 (-) True G26666
TU35838 lncRNA downstream 21413 46395961 ~ 46409064 (-) False G26666
TU35832 lncRNA downstream 68559 46361718 ~ 46361918 (-) True G26663
TU35757 lncRNA downstream 268378 46076136 ~ 46162099 (-) True G26605
TU35764 lncRNA downstream 363289 46066648 ~ 46067188 (-) True G26612
XR_002652516.1 lncRNA upstream 142362 46578287 ~ 46599431 (-) True LOC111197648
TU35951 lncRNA upstream 226194 46662119 ~ 46663963 (-) True G26751
TU35974 lncRNA upstream 669390 47105315 ~ 47106324 (-) True G26771
TU35987 lncRNA upstream 681657 47117582 ~ 47120006 (-) True G26783
TU36023 lncRNA upstream 762939 47198864 ~ 47199418 (-) True G26810
XM_022687087.1 mRNA downstream 14056 46410456 ~ 46416421 (-) True actr10
XM_022687064.1 mRNA downstream 25864 46396499 ~ 46404613 (-) True LOC107197829
XM_007230708.3 mRNA downstream 35410 46387659 ~ 46395067 (-) False LOC103044046
XM_007230709.3 mRNA downstream 35410 46387659 ~ 46395067 (-) True LOC103044046
XM_022678311.1 mRNA downstream 55560 46364129 ~ 46374917 (-) True LOC111194350
XM_007230721.3 mRNA upstream 44720 46480645 ~ 46499667 (-) True peli2
XM_007230722.3 mRNA upstream 76714 46512639 ~ 46514813 (-) True LOC103047706
XM_022678319.1 mRNA upstream 97881 46533806 ~ 46535835 (-) False fkbp3
XM_007230730.3 mRNA upstream 209712 46645637 ~ 46936593 (-) True LOC103022574
XM_007255391.3 mRNA upstream 653624 47089549 ~ 47094904 (-) True LOC103045279
TU35796 other downstream 137671 46292087 ~ 46292806 (-) True G26636
TU35737 other downstream 494855 45935153 ~ 45935622 (-) True G26588
TU35470 other downstream 992892 45436109 ~ 45437585 (-) True G26388
TU35363 other downstream 1544676 44882778 ~ 44885801 (-) True G26295
TU35356 other downstream 1559798 44867094 ~ 44870679 (-) False ubxn2a
TU35879 other upstream 82946 46518871 ~ 46521243 (-) False G26695
TU35877 other upstream 87723 46523648 ~ 46525996 (-) True G26695
TU35943 other upstream 97770 46533695 ~ 46535753 (-) True fkbp3
TU35957 other upstream 268422 46704347 ~ 46738736 (-) True G26754
TU36479 other upstream 2451069 48886994 ~ 48891028 (-) True G27145

Expression Profile