Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002648511.1 |
| length | 941 |
| RNA type | misc_RNA |
| GC content | 0.43 |
| exon number | 5 |
| gene id | LOC103034285 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 50522899 ~ 50539672 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU36808 | lncRNA | downstream | 2470 | 50517022 ~ 50533430 (-) | True | G27406 |
| XR_002648507.1 | lncRNA | downstream | 15216 | 50519575 ~ 50520684 (-) | True | LOC111188462 |
| TU36791 | lncRNA | downstream | 30147 | 50371766 ~ 50505753 (-) | True | G27392 |
| TU36788 | lncRNA | downstream | 195825 | 50339537 ~ 50340075 (-) | True | G27389 |
| TU36787 | lncRNA | downstream | 199743 | 50335878 ~ 50336157 (-) | True | G27388 |
| TU36809 | lncRNA | upstream | 450 | 50540122 ~ 50542059 (-) | True | G27407 |
| TU36812 | lncRNA | upstream | 6936 | 50546608 ~ 50549428 (-) | True | G27409 |
| TU36839 | lncRNA | upstream | 182025 | 50721697 ~ 50723923 (-) | True | G27425 |
| TU36844 | lncRNA | upstream | 205286 | 50744958 ~ 50746883 (-) | True | G27428 |
| TU36879 | lncRNA | upstream | 345859 | 50885531 ~ 50885896 (-) | True | G27454 |
| XM_007254920.3 | mRNA | downstream | 594894 | 49808094 ~ 49941006 (-) | False | epha7 |
| XM_007254921.3 | mRNA | downstream | 594894 | 49808094 ~ 49941006 (-) | False | epha7 |
| XM_007254919.3 | mRNA | downstream | 594894 | 49808094 ~ 49941006 (-) | True | epha7 |
| XM_007254918.3 | mRNA | downstream | 1388418 | 49119962 ~ 49147482 (-) | False | map3k7 |
| XM_022662230.1 | mRNA | upstream | 34088 | 50573760 ~ 50580682 (-) | True | LOC103033334 |
| XM_015601331.2 | mRNA | upstream | 34088 | 50573760 ~ 50576687 (-) | False | LOC103033334 |
| XM_022662275.1 | mRNA | upstream | 42675 | 50582347 ~ 50703118 (-) | True | map3k5 |
| XM_022662282.1 | mRNA | upstream | 42675 | 50582347 ~ 50703117 (-) | False | map3k5 |
| XM_007233460.3 | mRNA | upstream | 185391 | 50725063 ~ 50740434 (-) | False | pcmt1 |
| TU36802 | other | downstream | 4261 | 50481889 ~ 50531639 (-) | True | G27400 |
| TU36629 | other | downstream | 896456 | 49638759 ~ 49639444 (-) | True | G27258 |
| TU36630 | other | downstream | 896456 | 49638759 ~ 49639444 (-) | False | G27258 |
| XR_002649726.1 | other | downstream | 1100247 | 49434912 ~ 49435653 (-) | True | LOC111191920 |
| TU36479 | other | downstream | 1644872 | 48886994 ~ 48891028 (-) | True | G27145 |
| XR_001518286.2 | other | upstream | 185391 | 50725063 ~ 50740434 (-) | True | pcmt1 |
| TU37335 | other | upstream | 2246800 | 52786472 ~ 52849906 (-) | False | G27821 |
| TU37336 | other | upstream | 2246800 | 52786472 ~ 52827953 (-) | True | G27821 |
| trnal-cag | other | upstream | 3082604 | 53622276 ~ 53622358 (-) | False | trnal-cag |
| XR_002648645.1 | other | upstream | 3511089 | 54050761 ~ 54055697 (-) | False | LOC103040805 |
