Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022662454.1 |
| length | 1468 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 8 |
| gene id | rngtt |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 51192823 ~ 51222073 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006370 | 7-methylguanosine mRNA capping | biological_process |
| GO:0035335 | peptidyl-tyrosine dephosphorylation | biological_process |
| GO:0098507 | polynucleotide 5' dephosphorylation | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0004484 | mRNA guanylyltransferase activity | molecular_function |
| GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| GO:0004651 | polynucleotide 5'-phosphatase activity | molecular_function |
| GO:0004725 | protein tyrosine phosphatase activity | molecular_function |
| id | description |
|---|---|
| K13917 | RNGTT; mRNA-capping enzyme |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU36922 | lncRNA | upstream | 4493 | 51187863 ~ 51188330 (+) | True | G27491 |
| TU36911 | lncRNA | upstream | 25259 | 51162625 ~ 51167564 (+) | True | G27481 |
| TU36889 | lncRNA | upstream | 219579 | 50972937 ~ 50973244 (+) | True | G27463 |
| TU36757 | lncRNA | upstream | 489702 | 50702371 ~ 50703121 (+) | True | G27370 |
| TU36753 | lncRNA | upstream | 489754 | 50702371 ~ 50703069 (+) | False | G27370 |
| TU36926 | lncRNA | downstream | 5019 | 51227092 ~ 51227330 (+) | True | G27494 |
| TU36927 | lncRNA | downstream | 5349 | 51227422 ~ 51227631 (+) | True | G27495 |
| TU36999 | lncRNA | downstream | 257253 | 51479326 ~ 51535896 (+) | True | G27563 |
| TU37080 | lncRNA | downstream | 785841 | 52007914 ~ 52008225 (+) | True | G27633 |
| TU37090 | lncRNA | downstream | 866258 | 52088331 ~ 52090633 (+) | False | dsel |
| XM_007255209.3 | mRNA | upstream | 47428 | 51084068 ~ 51145395 (+) | True | gabrr1 |
| XM_022662373.1 | mRNA | upstream | 162031 | 50980515 ~ 51030792 (+) | True | LOC103030377 |
| XM_022662442.1 | mRNA | upstream | 220159 | 50896361 ~ 50972664 (+) | True | ube2j1 |
| XM_007255207.3 | mRNA | upstream | 420661 | 50769863 ~ 50772162 (+) | True | lyrm2 |
| XM_007255206.3 | mRNA | upstream | 424584 | 50758025 ~ 50768239 (+) | True | lats1 |
| XM_022662257.1 | mRNA | downstream | 281147 | 51503220 ~ 51582902 (+) | False | dnajc13 |
| XM_022662237.1 | mRNA | downstream | 281148 | 51503221 ~ 51584097 (+) | True | dnajc13 |
| XM_022662242.1 | mRNA | downstream | 281148 | 51503221 ~ 51584097 (+) | False | dnajc13 |
| XM_022662245.1 | mRNA | downstream | 281148 | 51503221 ~ 51584097 (+) | False | dnajc13 |
| XM_022662247.1 | mRNA | downstream | 281148 | 51503221 ~ 51582913 (+) | False | dnajc13 |
| TU36920 | other | upstream | 14449 | 51174488 ~ 51178374 (+) | True | G27489 |
| TU36770 | other | upstream | 420662 | 50769885 ~ 50772161 (+) | False | lyrm2 |
| TU36768 | other | upstream | 442886 | 50744907 ~ 50749937 (+) | False | nup43 |
| TU36697 | other | upstream | 852746 | 50339710 ~ 50340077 (+) | False | moxd1 |
| TU36609 | other | upstream | 1744602 | 49447845 ~ 49448221 (+) | True | G27238 |
| TU37134 | other | downstream | 1091952 | 52314025 ~ 52314266 (+) | True | G27683 |
| TU37199 | other | downstream | 1232358 | 52454431 ~ 52456164 (+) | True | G27729 |
| trnac-gca_8 | other | downstream | 1246699 | 52468772 ~ 52468843 (+) | True | trnac-gca_8 |
| TU37261 | other | downstream | 1538040 | 52760113 ~ 52765175 (+) | False | LOC111188765 |
| trnah-gug | other | downstream | 2400750 | 53622823 ~ 53622894 (+) | True | trnah-gug |
