RNA id: XM_022686450.1


Basic Information

Item Value
RNA id XM_022686450.1
length 4528
RNA type mRNA
GC content 0.42
exon number 20
gene id kifap3
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 43946979 ~ 43981364 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ATTATGGGAGATCACGCCCTGGCAACACAAACATCAACATTAGACCGAGCCGCAGAAGCAGAGCAGAATGAATATCAGAGAaaatcagtaaaactgagcctcTGAACACACAGAACAGCGGAGATACAGCGCGGACAGCTCTCTACACGCTCTCAGCATGCAGGCAGACGATGTGAGATATTTAACCAGGAAAGTGAAGGGAGGCAGTTTGGATGTTCATCCTACAGAGAGAGCCTTGGTTGTCAACTATGAAGTTGAAGCAAGGATCTTGGGACAGATGGGTGATGCCATGTTGGGAGAACGTAAGGCATGTCAGAAAATAATTCGTCTGAAAAGCCTCAATCCCAACACTGACATTGGGTCATTGGCACGGAAGGTGGTGGAGGAATGCAGGCTGATTTCACCAACCAAACTCCCAGAAGTGGAACAGCTTCTCTTCTATCTGCAGAATCGCAAATCTCCCACAGaaaaaaaggagaagaaacaGATCAAACCAAGAGATCCTACTCCTTTCGAAGGGATGGAGCTGGATGAGGAGGCTAATATTAATAGCATAGATGATTATGTGGAGCTGCTGTATGAAGACGTCCCAGAGAAAATCAGAGGAGCCACGCTTATCCTGCACCTGGCCCGGAACCCTGACAACCTGGAGGAACTCCTACAAAATGAGACTGCACTCGGAGCTCTAGCACGAGTACTGAGGGAGGACTGGAAGCAGAGCGTGGATCTGGCAACCACCATCATCTATgtcttcttctgtttctccagTTTCATCCAATTCCATGGACTGATCACCCACTACAAGATCGGTGCCCTGTGTATGAACATCATCGAGCACGAGCTGAAGAGGTACGACCTGTGgcaggaggagctgcagaagaagaagaaggctgGGGAGGATGACCCagagaaccagaacctgaaGAAAGAATACGAGAAAGCTCTGAAGAAGTACCAGGGTCTGCTGACCAAACAGGAGCAGCTGCTTCGAGTGGCTCTGTATCTGCTGCTGAACTTATCTGAGGACACACGCACTGAACTGAAGATGAGGAACAAGAACATAGTGCACCTACTGGTGAAGACCCTGGACAGAGACAGTGAGGAGCTCCTGGTGCTGGTTGTGTCCTTCCTGAAGAAGCTCAGCATTTTTCTGGAGAACAAGAATGACATGGCTGAAACTGACACAGTGGAGAAGCTGGCGAAGCTGGTGCCCTGTGATCATGAAGATCTGCTGAATGTCACTCTACGTCTCCTCCACAACCTCTCTTTCGACACAGGCCTCCGCAGCAAGATGGTGCAGGTGGGCCTGCTGCCCAAACTTACTGCTCTATTAGgtgatGAAGCACAGAGACATCTATCCATGCGCATCCTGTACCACATCAGCATGGACGACCGTTTCAAGTCCATGTTCGCCTACACTGACTGCATTCCACAGGTGATGAAGATGTTGTTTGATTGCGGCGAGGAGAGGATGGACCCAGAGCTCATCTccttctgcatcaatttggctGCCAACAAGAGAAATGCCCAGCTCATCTGTGAAGGCAATGGGTTGAAGATGCTGATGAAAAGAGCACTGAAATTAAAGGATCCTCTGATGATGAAAATGATCCGGAACATCTCGCAGCACGACGGACCCTCCATGAACCTATTTATTGACTATGTGGGAGACTTGGCAGCACAGATTGGACAGAATGAAGAGGAGGAGTTTATGATCGAGTGTTTGGGGACCCTGGCTAACCTCACCATCCCTGACCTGGACTGGGAGCTAGTGCTTAAAGAATACAACCTGGTACCCTTTCTAAAAGACCATCTTAAACCTGGCTGTGCCGAAGATGACCTTGTGCTGGAAGTGGTGATTATGATTGGCACAGTCTCCATGGACGACTCGTGTGCTGCCATGCTAGCCAAGTCAGGCATCATTCCAGCTCTTATAGAGCTTCTCAATGCTCAACAGGAGGATGATGAGTTTGTGTGTCAGATTGTGTACGTCTTCTACCAGATGGTGTTTCACCAGGCCACACGTGACGTCATTATTAAGGAGACACAAGCTCCAGCGTACCTCATTGACCTGATGCACGACAAGAATGCTGAAATTCGCAAAGTCTGTGACAACACGCTGGACATTATAGCCGAGTATGATGAAGAATGGGGAAGGAAGATCCAGAACGAGAAGTTTCGCTGGCACAACTCTCAGTGGCTGGAGATGGTGGAAAACCGGCAGATGGATGAAGCAGAACCCTTCATGTATGGGGATGAGGGAGAGCCTTTCTTGCAGGGAGGAGACATCCTGGAGAGGCCCGACCTCTTCTACAGCGCAGATGGATTAATCACAGCCGACAGTGCAATCAGTCCAGAATTCTTCACAGACTTCCAGAATGGAGACTTTGTGGGACCACCGGGTTTTCCTAGCAGTGCTGTATCTGACGGGTTTGGTCAAGTGGCAGGAGCTCCTGTACGTCCTACAACGGCCTACGGCTTCCGTCCAGACGAGCAGTACTACTACAGCTACTCAGCATCGCGGTAGAGCACTGCAGATCTCACTGAcaaataaatgaacactgttacTTTGACTCATCTTCTCTTTTAAGCAACAAAACACTATTAATgctattaatgttatttattcacTCCATTTCAAACGCGTACAATTTGAGTTGGGCAAAGTATTCACTGGTTTCATGTGATCCGTGGTTTTAAGCTTGTCATTAGACTACTTTACAATGTCTGAAGCActgaattttaaatgtatagtgCAGTTTTAATGTGTCTTAACTTAACAGTTGATTTGTTTCAAAGATAAAATCATTAGTGCATGAATTCTGATGCACCACATCGCCTTTATTTCAGCAGCCTTCTGCAGTATAGCAGAGGTAGGAGGTAGGAGTTATTATTTGCATGATCATTCAGAACTCAGTTCAGAGGTCCAGTTCATTACGTGTATAGAGACAGTGTTagtgttatttttcttttattgcatGCTGTAGTGCAGtctagtttatagtttttaggAGAGTGTCATGTAGAGCTTTGATCAACCAAGATTCTGTGGATAAAACCTGTTAAGTTATTTATATCTGTGGCAGCTTTGGTTACAGAAGGCCAGTAAATGCACATGATGAACAATCCTGTAATATGTTCAGAAAGAATTTATCGTCAAAATAATACTGGTGTTCATATTGATCAGGCTACACATATTGTTAATTAGCATTTTAAGCCATAAGTTGTGTgtagaatatttttaaattcttctCTCTAATTCTATTATATCACGGATTCACTGAATTTGTCAGAGAGGTTTTTTTGtaggttttcattcattttgccacttttcaccatttattaaattaaatagcctaaatgttttgtgaaaagaaaaatatgtaaaaagaaattacaattacaatttgaAACTATTTATTGAACCCTGAAGATTTTTATGTCCCAAGTGATTGCAATTTTATTGTGTCATCAAAAGGCCCATTATTTGGTATACATCTTTAAATTTATTTGACCGAAAAACGATTAAATGTTTTGATGAAATATTTTTGTTGgtgaatatttggtgcatcactacatttatatataagctTCATTGTAGTAAGTgaagtaaattaatattatagttAAAGGCTTTGTCAATAGTCATGTTAATTCATTGCAGCTTTGACAACTTGTTGGATTCGGcctttagaattacagttttatgtcAGTTGTCATGAAAAGCATAAGTAGGTGTTGTAAACTTTTAGGCTGTTTACACTTTTCGATTAGTATGGTTATAATGTGCAACaatacattgttgtttaattccaCAGACTTGGGCAAGACCTCATAACTCTGCATTTATTCAtctgtgtaatgtaatgtaagttgCTCTGCATAAGAGTATCAACCAAATGCTGATTGAATGTATAAAATTTAGGGATAAGGGATTTCTATAAGAAGGAACATATGAAACGCATGTTTATGCAAAGTGTAATCAccctcaaattaaaaacataatataatatataataatgaatctCCAAATGTCCAAGAGGTTCACTCTGAATCCCTTCAGTGGTTCATTGACCTGGATTTATTTACACACATTCCCATACATCGATTCAGATCGGTTATTCTGGCTGCTGAAGTGAAGTGAACTGAAGCTTGAGGCTTTGGATAAAGTGTATAGCTGGATAATTGTGACACTAGCTGAAGTGTTGCTGTGTCTTAACAtgtctgtatttattgtaaatgcAAAAGGTCTGTTGCCTTGTCTCTGTTTCTGCTGAAAAACTGCCGAGCAGCTCGATATTGTACACTTTTGATTATGATTACTGCAGATTTTTTGGTTGTTGTTGGCAAACGGAAATAAGTGAAAAGTTTATTCTATATTAAGTTTTTAATGTAATACTGTTAAATGGAGTTGCATATGCTTTCTTGGTGCCTGACAATCGTcttaactgtttgatttgttttgttttatttgatatgtttttattattacagtggtGCAATATTAAACTATAACAAATCTGAAGAA

Function

GO:

id name namespace
GO:0005871 kinesin complex cellular_component
GO:0019894 kinesin binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU34947 lncRNA downstream 22627 43921876 ~ 43924352 (-) True G26009
TU34938 lncRNA downstream 47228 43899036 ~ 43899751 (-) False cbr4
TU34914 lncRNA downstream 61941 43866376 ~ 43885038 (-) False G25986
TU34912 lncRNA downstream 61941 43868717 ~ 43885038 (-) False G25986
TU34910 lncRNA downstream 61941 43876628 ~ 43885038 (-) True G25986
TU34963 lncRNA upstream 19624 44000988 ~ 44001408 (-) True G26024
TU34964 lncRNA upstream 33776 44015140 ~ 44015348 (-) True G26025
TU34982 lncRNA upstream 54163 44035527 ~ 44035757 (-) True G26031
TU34983 lncRNA upstream 55938 44037302 ~ 44037837 (-) True G26032
TU34996 lncRNA upstream 73576 44054940 ~ 44056299 (-) True G26038
XM_007245330.3 mRNA downstream 47219 43890629 ~ 43899760 (-) True cbr4
XM_007245332.3 mRNA downstream 47252 43890668 ~ 43899727 (-) False cbr4
XM_007245326.3 mRNA downstream 230781 43709728 ~ 43716198 (-) True LOC103035417
XM_022678289.1 mRNA downstream 243010 43688898 ~ 43703969 (-) True LOC103035096
XM_007245324.3 mRNA downstream 273989 43666847 ~ 43672990 (-) True LOC103034775
XM_015604841.2 mRNA upstream 220755 44202119 ~ 44219005 (-) True slc25a24
XM_015604837.2 mRNA upstream 275087 44256451 ~ 44263193 (-) False LOC103039281
XM_022686536.1 mRNA upstream 275087 44256451 ~ 44260960 (-) True LOC103039281
XM_007245344.3 mRNA upstream 317583 44298947 ~ 44308698 (-) False LOC103040630
XM_022686561.1 mRNA upstream 317583 44298947 ~ 44308279 (-) False LOC103040630
TU34885 other downstream 268117 43675025 ~ 43678862 (-) True G25967
TU34644 other downstream 835578 43098822 ~ 43111401 (-) True G25785
TU34500 other downstream 1228590 42717666 ~ 42718389 (-) True G25678
XR_002652157.1 other downstream 2081135 41857039 ~ 41865844 (-) False LOC111196508
TU35290 other upstream 787928 44769292 ~ 44799475 (-) False fkbp1b
TU35291 other upstream 787928 44769292 ~ 44799475 (-) False fkbp1b
TU35356 other upstream 885730 44867094 ~ 44870679 (-) False ubxn2a
TU35363 other upstream 901414 44882778 ~ 44885801 (-) True G26295
TU35470 other upstream 1454745 45436109 ~ 45437585 (-) True G26388

Expression Profile