RNA id: XM_022687087.1



Basic Information


Item Value
RNA id XM_022687087.1
length 1232
RNA type mRNA
GC content 0.48
exon number 12
gene id actr10
representative True

Chromosome Information


Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 46410456 ~ 46416421 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


CCGCCCGGCCTGCTGCTCTGCTCTCCGGACACACAGCGGGGCTGTGCTCAGCGCTCTGTGTTTTGGTTTatatctctctgtgtgtgtgtgatcgggCGGACAGCGTCTGGAGGGATTCAGTAGTGGTCAGGATGCCGCTgtttgaggttttggggagCGGAGGAGAGAAGACGGCCGTGGTGATCGATTTAGGAGCTGCCTACACAAAGTGTGGCTTTGCTGGTGAGACTGGGCCGAGGTTTATCATCCCTAGTGAGATCCAGCGTCCTGGAGTACAGCAGcCCATTAAAGTGGTGCAGTACAACATAAACACAGAGGAGCTGTACACTAACCTGAAGGAGTTCATTCACATGCTGTACTTTAGGCATTTGCTCGTAAACCCACGTGACCGAAGAGTGGTTATCATTGAGTCCATCCTCTGTCCCTCACACTTCAGAGAAACTCTGTCCAAAGTATTCTTCAAGCACTTTGAGGTTCCATCAGTTCTCTTTGCTCCCAGCCATCTAATGTCCATCATGACTTTGGGTATCAACTCAGCCCTTGTGATGGATTGTGGATATACAGAAACATTGGTGTTACCTGTTTATGAAGGAATCCCCATCCTGTCTGCTTGGGAAGCTTTGCCGATGGGTGGAAAGGCTATTCACAAAGAATTGGATAGTCTGCTGACGGAACAATGTACAGTGGATACAGACTCAGGCACTGGCCACAGCTTACCCACTGTGATAGGCACAGTCTCTGAAGAGGTGGTTGAAGACATCAAAGtAAGGACATGCTTTGTCAGTGACTTGCAAAGAGGTCTGAAAATCCAGGAGGCCAAGTTCAACATGGATGGAACTGCAGAGagacctgctcctcctcctgatgTTGATTATCCCTTGGATGGAGAAAAGATTCTGCACATTAAGGGATCAATTAGAGACTCAATTGCTGAGATGTTGTTTGAACAGGACAACGAAGAAAAATCTATTGCTACATTAATCCTTGATACTCTTGTTAAGTGTCCTATTGATACAAGGAAGGTTCTTTCTGAGAACTTGTTGGTAATTGGCGGGACATCCATGCTTCCTGGCTTTCTTCACCGCCTCCTGGCTGAGATCCGTTTGCTGGTGGAAAAGCCCAAATACTGTGATGCTCTAGCTACCAAGAGCTTTCGCCTTCACAGTCCACCAGCCAAGCCCAACTGTACTGCCTGGCTAGGAGGTGAGAGATTATAGCCTCTAATTATATCT

Function


GO: NA

KEGG:

id description
K16576 ACTR10, ARP11; actin-related protein 10

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35837 lncRNA downstream 1392 46395961 ~ 46409064 (-) True G26666
TU35838 lncRNA downstream 1392 46395961 ~ 46409064 (-) False G26666
TU35832 lncRNA downstream 48538 46361718 ~ 46361918 (-) True G26663
TU35757 lncRNA downstream 248357 46076136 ~ 46162099 (-) True G26605
TU35764 lncRNA downstream 343268 46066648 ~ 46067188 (-) True G26612
XR_002652516.1 lncRNA upstream 161866 46578287 ~ 46599431 (-) True LOC111197648
TU35951 lncRNA upstream 245698 46662119 ~ 46663963 (-) True G26751
TU35974 lncRNA upstream 688894 47105315 ~ 47106324 (-) True G26771
TU35987 lncRNA upstream 701161 47117582 ~ 47120006 (-) True G26783
TU36023 lncRNA upstream 782443 47198864 ~ 47199418 (-) True G26810
XM_022687064.1 mRNA downstream 5843 46396499 ~ 46404613 (-) True LOC107197829
XM_007230708.3 mRNA downstream 15389 46387659 ~ 46395067 (-) False LOC103044046
XM_007230709.3 mRNA downstream 15389 46387659 ~ 46395067 (-) True LOC103044046
XM_022678311.1 mRNA downstream 35539 46364129 ~ 46374917 (-) True LOC111194350
XM_007230704.3 mRNA downstream 49630 46352209 ~ 46360826 (-) False LOC103043020
XM_015607841.2 mRNA upstream 14056 46430477 ~ 46435925 (-) True naa30
XM_007230721.3 mRNA upstream 64224 46480645 ~ 46499667 (-) True peli2
XM_007230722.3 mRNA upstream 96218 46512639 ~ 46514813 (-) True LOC103047706
XM_022678319.1 mRNA upstream 117385 46533806 ~ 46535835 (-) False fkbp3
XM_007230730.3 mRNA upstream 229216 46645637 ~ 46936593 (-) True LOC103022574
TU35796 other downstream 117650 46292087 ~ 46292806 (-) True G26636
TU35737 other downstream 474834 45935153 ~ 45935622 (-) True G26588
TU35470 other downstream 972871 45436109 ~ 45437585 (-) True G26388
TU35363 other downstream 1524655 44882778 ~ 44885801 (-) True G26295
TU35356 other downstream 1539777 44867094 ~ 44870679 (-) False ubxn2a
XR_001518806.2 other upstream 10996 46427417 ~ 46435925 (-) False naa30
TU35879 other upstream 102450 46518871 ~ 46521243 (-) False G26695
TU35877 other upstream 107227 46523648 ~ 46525996 (-) True G26695
TU35943 other upstream 117274 46533695 ~ 46535753 (-) True fkbp3
TU35957 other upstream 287926 46704347 ~ 46738736 (-) True G26754

Expression Profile