Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002648882.1 |
| length | 499 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 4 |
| gene id | LOC111189782 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 57849734 ~ 57853758 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU38907 | lncRNA | downstream | 8446 | 57837947 ~ 57841288 (-) | False | ppp4r4 |
| TU38914 | lncRNA | downstream | 8647 | 57837636 ~ 57841087 (-) | False | ppp4r4 |
| TU38908 | lncRNA | downstream | 8647 | 57837947 ~ 57841087 (-) | False | ppp4r4 |
| TU38886 | lncRNA | downstream | 48863 | 57799062 ~ 57800871 (-) | True | G28960 |
| TU38885 | lncRNA | downstream | 51353 | 57798091 ~ 57798381 (-) | True | G28959 |
| TU38935 | lncRNA | upstream | 22513 | 57876271 ~ 57876745 (-) | True | G28997 |
| TU39042 | lncRNA | upstream | 137883 | 57991641 ~ 57995476 (-) | True | LOC103041090 |
| XR_002648892.1 | lncRNA | upstream | 138645 | 57992403 ~ 57994113 (-) | True | LOC111189816 |
| TU39044 | lncRNA | upstream | 148361 | 58002119 ~ 58057460 (-) | True | G29085 |
| TU39078 | lncRNA | upstream | 268706 | 58122464 ~ 58124565 (-) | True | G29108 |
| XM_022678386.1 | mRNA | downstream | 8416 | 57812262 ~ 57841318 (-) | True | ppp4r4 |
| XM_022678382.1 | mRNA | downstream | 96591 | 57685492 ~ 57753143 (-) | True | LOC111194372 |
| XM_007258212.3 | mRNA | downstream | 194654 | 57607770 ~ 57655080 (-) | False | LOC103043676 |
| XM_007258211.3 | mRNA | downstream | 194654 | 57607770 ~ 57655080 (-) | True | LOC103043676 |
| XM_007258215.3 | mRNA | downstream | 359011 | 57450925 ~ 57490723 (-) | True | LOC103044195 |
| XM_007258202.3 | mRNA | upstream | 137883 | 57991641 ~ 57995472 (-) | False | LOC103041090 |
| XM_022663501.1 | mRNA | upstream | 207065 | 58060823 ~ 58076565 (-) | True | LOC103040793 |
| XM_022663546.1 | mRNA | upstream | 227912 | 58081670 ~ 58083483 (-) | True | tmem251 |
| XM_007258199.3 | mRNA | upstream | 282851 | 58136609 ~ 58149747 (-) | False | chga |
| XM_007258198.3 | mRNA | upstream | 282851 | 58136609 ~ 58149747 (-) | False | chga |
| XR_452898.2 | other | downstream | 1155609 | 56646027 ~ 56694125 (-) | False | LOC103031416 |
| TU38322 | other | downstream | 2033136 | 55815872 ~ 55816598 (-) | True | G28536 |
| TU38270 | other | downstream | 2242848 | 55602870 ~ 55606886 (-) | True | G28501 |
| TU38271 | other | downstream | 2243452 | 55602870 ~ 55606282 (-) | False | G28501 |
| TU38134 | other | downstream | 2347974 | 55499900 ~ 55501760 (-) | False | LOC111189318 |
| TU39086 | other | upstream | 315563 | 58169321 ~ 58174704 (-) | False | LOC111189852 |
| TU39330 | other | upstream | 1079205 | 58932963 ~ 58934789 (-) | True | G29317 |
| TU39539 | other | upstream | 1583842 | 59437600 ~ 59438298 (-) | True | G29478 |
| TU39714 | other | upstream | 2303780 | 60157538 ~ 60162024 (-) | False | LOC103034188 |
| XR_002649735.1 | other | upstream | 2515288 | 60369046 ~ 60369614 (-) | True | LOC111191938 |
