RNA id: trnad-guc_10


Basic Information

Item Value
RNA id trnad-guc_10
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnad-guc_10
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65099291 ~ 65099362 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCGACGGGGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU41249 lncRNA upstream 13158 65083989 ~ 65086133 (+) False LOC103031672
TU41246 lncRNA upstream 18340 65076472 ~ 65080951 (+) True G30726
TU41242 lncRNA upstream 39841 65057519 ~ 65059450 (+) True G30722
TU41241 lncRNA upstream 41303 65057519 ~ 65057988 (+) False G30722
TU41204 lncRNA upstream 53613 65032607 ~ 65045678 (+) False LOC103033886
TU41296 lncRNA downstream 271046 65370408 ~ 65371798 (+) True G30763
TU41300 lncRNA downstream 304160 65403522 ~ 65441108 (+) True G30767
TU41304 lncRNA downstream 330872 65430234 ~ 65432399 (+) True G30771
TU41306 lncRNA downstream 332097 65431459 ~ 65433073 (+) False G30772
TU41307 lncRNA downstream 332097 65431459 ~ 65433073 (+) True G30772
XM_022678446.1 mRNA upstream 12511 65077780 ~ 65086780 (+) True LOC103031672
XM_007259496.3 mRNA upstream 31893 65061824 ~ 65067398 (+) True mmachc
XM_007259499.3 mRNA upstream 52313 65022419 ~ 65046978 (+) True LOC103033886
XM_007259501.3 mRNA upstream 164823 64926535 ~ 64934468 (+) True LOC103034427
XM_007259503.2 mRNA upstream 208638 64880938 ~ 64890653 (+) True LOC103035066
XM_007259524.2 mRNA downstream 8148 65107510 ~ 65146627 (+) True LOC103041220
XM_007259490.3 mRNA downstream 83995 65183357 ~ 65211505 (+) True LOC103031359
XM_007259489.3 mRNA downstream 113331 65212693 ~ 65224500 (+) True echdc2
XM_007259483.3 mRNA downstream 147169 65246531 ~ 65249310 (+) True LOC103029237
XM_007259487.3 mRNA downstream 147973 65247335 ~ 65447846 (+) False ralgps2
trnad-guc_9 other upstream 718 65098502 ~ 65098573 (+) True trnad-guc_9
trnad-guc_6 other upstream 24104 65075116 ~ 65075187 (+) True trnad-guc_6
trnad-guc_5 other upstream 24649 65074571 ~ 65074642 (+) True trnad-guc_5
trnad-guc_4 other upstream 25619 65073601 ~ 65073672 (+) True trnad-guc_4
TU40731 other upstream 1753598 63335734 ~ 63345693 (+) False G30362
TU41629 other downstream 729419 65828781 ~ 65837365 (+) True G31000
XR_002649741.1 other downstream 749765 65849127 ~ 65849762 (+) True LOC111191945
TU42094 other downstream 2114943 67214305 ~ 67215186 (+) True G31355
TU42187 other downstream 2397841 67497203 ~ 67497697 (+) True G31407
TU42315 other downstream 2732458 67831820 ~ 67833215 (+) False hmcn1