RNA id: trnae-uuc_4


Basic Information

Item Value
RNA id trnae-uuc_4
length 72
RNA type tRNA
GC content 0.57
exon number 1
gene id trnae-uuc_4
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53625672 ~ 53625743 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTTCACCCAGGCGGCCCGGGTTCAACTCCCGGTATGGGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37481 lncRNA upstream 11665 53613777 ~ 53614007 (+) True G27935
TU37469 lncRNA upstream 48474 53576776 ~ 53577198 (+) True G27923
TU37463 lncRNA upstream 90447 53534600 ~ 53535225 (+) True G27917
TU37446 lncRNA upstream 121248 53499475 ~ 53504424 (+) True G27903
TU37398 lncRNA upstream 294895 53327872 ~ 53330777 (+) True G27875
TU37508 lncRNA downstream 48845 53674588 ~ 53675007 (+) True G27962
TU37511 lncRNA downstream 61956 53687699 ~ 53689734 (+) True G27964
TU37513 lncRNA downstream 65983 53691726 ~ 53693741 (+) True G27966
TU37523 lncRNA downstream 70207 53695950 ~ 53696768 (+) True G27972
TU37538 lncRNA downstream 88022 53713765 ~ 53715952 (+) True G27984
XM_022662592.1 mRNA upstream 796388 52825184 ~ 52829284 (+) False LOC103041583
XM_022662601.1 mRNA upstream 796388 52825184 ~ 52829284 (+) False LOC103041583
XM_022662581.1 mRNA upstream 796388 52825246 ~ 52829284 (+) True LOC103041583
XM_022662588.1 mRNA upstream 796388 52825246 ~ 52829284 (+) False LOC103041583
XM_022662560.1 mRNA upstream 809178 52811053 ~ 52816494 (+) True LOC111188773
XM_022662659.1 mRNA downstream 337819 53963562 ~ 54049416 (+) False epb41l2
XM_022662654.1 mRNA downstream 337819 53963562 ~ 54049416 (+) True epb41l2
XM_022662728.1 mRNA downstream 337819 53963562 ~ 54049416 (+) False epb41l2
XM_022662663.1 mRNA downstream 337819 53963562 ~ 54049416 (+) False epb41l2
XM_022662732.1 mRNA downstream 337819 53963562 ~ 54049416 (+) False epb41l2
trnah-gug_2 other upstream 288 53625313 ~ 53625384 (+) True trnah-gug_2
trnam-cau_6 other upstream 738 53624862 ~ 53624934 (+) True trnam-cau_6
trnar-acg_1 other upstream 906 53624694 ~ 53624766 (+) True trnar-acg_1
trnae-uuc_3 other upstream 1174 53624427 ~ 53624498 (+) True trnae-uuc_3
trnah-gug_1 other upstream 1533 53624068 ~ 53624139 (+) True trnah-gug_1
trnar-acg_2 other downstream 196 53625939 ~ 53626011 (+) True trnar-acg_2
trnam-cau_7 other downstream 364 53626107 ~ 53626179 (+) True trnam-cau_7
trnah-gug_3 other downstream 815 53626558 ~ 53626629 (+) True trnah-gug_3
trnae-uuc_5 other downstream 1174 53626917 ~ 53626988 (+) True trnae-uuc_5
trnar-acg_3 other downstream 1441 53627184 ~ 53627256 (+) True trnar-acg_3