RNA id: trnae-uuc_6


Basic Information

Item Value
RNA id trnae-uuc_6
length 72
RNA type tRNA
GC content 0.57
exon number 1
gene id trnae-uuc_6
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53628162 ~ 53628233 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTTCACCCAGGCGGCCCGGGTTCAACTCCCGGTATGGGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37481 lncRNA upstream 14155 53613777 ~ 53614007 (+) True G27935
TU37469 lncRNA upstream 50964 53576776 ~ 53577198 (+) True G27923
TU37463 lncRNA upstream 92937 53534600 ~ 53535225 (+) True G27917
TU37446 lncRNA upstream 123738 53499475 ~ 53504424 (+) True G27903
TU37398 lncRNA upstream 297385 53327872 ~ 53330777 (+) True G27875
TU37508 lncRNA downstream 46355 53674588 ~ 53675007 (+) True G27962
TU37511 lncRNA downstream 59466 53687699 ~ 53689734 (+) True G27964
TU37513 lncRNA downstream 63493 53691726 ~ 53693741 (+) True G27966
TU37523 lncRNA downstream 67717 53695950 ~ 53696768 (+) True G27972
TU37538 lncRNA downstream 85532 53713765 ~ 53715952 (+) True G27984
XM_022662592.1 mRNA upstream 798878 52825184 ~ 52829284 (+) False LOC103041583
XM_022662601.1 mRNA upstream 798878 52825184 ~ 52829284 (+) False LOC103041583
XM_022662581.1 mRNA upstream 798878 52825246 ~ 52829284 (+) True LOC103041583
XM_022662588.1 mRNA upstream 798878 52825246 ~ 52829284 (+) False LOC103041583
XM_022662560.1 mRNA upstream 811668 52811053 ~ 52816494 (+) True LOC111188773
XM_022662659.1 mRNA downstream 335329 53963562 ~ 54049416 (+) False epb41l2
XM_022662654.1 mRNA downstream 335329 53963562 ~ 54049416 (+) True epb41l2
XM_022662728.1 mRNA downstream 335329 53963562 ~ 54049416 (+) False epb41l2
XM_022662663.1 mRNA downstream 335329 53963562 ~ 54049416 (+) False epb41l2
XM_022662732.1 mRNA downstream 335329 53963562 ~ 54049416 (+) False epb41l2
trnah-gug_4 other upstream 288 53627803 ~ 53627874 (+) True trnah-gug_4
trnam-cau_8 other upstream 738 53627352 ~ 53627424 (+) True trnam-cau_8
trnar-acg_3 other upstream 906 53627184 ~ 53627256 (+) True trnar-acg_3
trnae-uuc_5 other upstream 1174 53626917 ~ 53626988 (+) True trnae-uuc_5
trnah-gug_3 other upstream 1533 53626558 ~ 53626629 (+) True trnah-gug_3
trnar-acg_4 other downstream 196 53628429 ~ 53628501 (+) True trnar-acg_4
trnam-cau_9 other downstream 364 53628597 ~ 53628669 (+) True trnam-cau_9
trnah-gug_5 other downstream 815 53629048 ~ 53629119 (+) True trnah-gug_5
trnae-uuc_7 other downstream 1174 53629407 ~ 53629478 (+) True trnae-uuc_7
trnar-acg_5 other downstream 1441 53629674 ~ 53629746 (+) True trnar-acg_5