RNA id: trnah-gug


Basic Information

Item Value
RNA id trnah-gug
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnah-gug
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53622823 ~ 53622894 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTGTGGCCGCAGCAACCCCGGTTCGAATCCGGGTCACGGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37481 lncRNA upstream 8816 53613777 ~ 53614007 (+) True G27935
TU37469 lncRNA upstream 45625 53576776 ~ 53577198 (+) True G27923
TU37463 lncRNA upstream 87598 53534600 ~ 53535225 (+) True G27917
TU37446 lncRNA upstream 118399 53499475 ~ 53504424 (+) True G27903
TU37398 lncRNA upstream 292046 53327872 ~ 53330777 (+) True G27875
TU37508 lncRNA downstream 51694 53674588 ~ 53675007 (+) True G27962
TU37511 lncRNA downstream 64805 53687699 ~ 53689734 (+) True G27964
TU37513 lncRNA downstream 68832 53691726 ~ 53693741 (+) True G27966
TU37523 lncRNA downstream 73056 53695950 ~ 53696768 (+) True G27972
TU37538 lncRNA downstream 90871 53713765 ~ 53715952 (+) True G27984
XM_022662592.1 mRNA upstream 793539 52825184 ~ 52829284 (+) False LOC103041583
XM_022662601.1 mRNA upstream 793539 52825184 ~ 52829284 (+) False LOC103041583
XM_022662581.1 mRNA upstream 793539 52825246 ~ 52829284 (+) True LOC103041583
XM_022662588.1 mRNA upstream 793539 52825246 ~ 52829284 (+) False LOC103041583
XM_022662560.1 mRNA upstream 806329 52811053 ~ 52816494 (+) True LOC111188773
XM_022662659.1 mRNA downstream 340668 53963562 ~ 54049416 (+) False epb41l2
XM_022662654.1 mRNA downstream 340668 53963562 ~ 54049416 (+) True epb41l2
XM_022662728.1 mRNA downstream 340668 53963562 ~ 54049416 (+) False epb41l2
XM_022662663.1 mRNA downstream 340668 53963562 ~ 54049416 (+) False epb41l2
XM_022662732.1 mRNA downstream 340668 53963562 ~ 54049416 (+) False epb41l2
TU37261 other upstream 857648 52760113 ~ 52765175 (+) False LOC111188765
trnac-gca_8 other upstream 1153980 52468772 ~ 52468843 (+) True trnac-gca_8
TU37199 other upstream 1166659 52454431 ~ 52456164 (+) True G27729
TU37134 other upstream 1308557 52314025 ~ 52314266 (+) True G27683
TU36920 other upstream 2444449 51174488 ~ 51178374 (+) True G27489
trnae-uuc_2 other downstream 288 53623182 ~ 53623253 (+) True trnae-uuc_2
trnar-acg other downstream 555 53623449 ~ 53623521 (+) True trnar-acg
trnam-cau_5 other downstream 723 53623617 ~ 53623689 (+) True trnam-cau_5
trnah-gug_1 other downstream 1174 53624068 ~ 53624139 (+) True trnah-gug_1
trnae-uuc_3 other downstream 1533 53624427 ~ 53624498 (+) True trnae-uuc_3

Expression Profile