RNA id: trnah-gug_1


Basic Information

Item Value
RNA id trnah-gug_1
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnah-gug_1
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53624068 ~ 53624139 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTGTGGCCGCAGCAACCCCGGTTCGAATCCGGGTCACGGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37481 lncRNA upstream 10061 53613777 ~ 53614007 (+) True G27935
TU37469 lncRNA upstream 46870 53576776 ~ 53577198 (+) True G27923
TU37463 lncRNA upstream 88843 53534600 ~ 53535225 (+) True G27917
TU37446 lncRNA upstream 119644 53499475 ~ 53504424 (+) True G27903
TU37398 lncRNA upstream 293291 53327872 ~ 53330777 (+) True G27875
TU37508 lncRNA downstream 50449 53674588 ~ 53675007 (+) True G27962
TU37511 lncRNA downstream 63560 53687699 ~ 53689734 (+) True G27964
TU37513 lncRNA downstream 67587 53691726 ~ 53693741 (+) True G27966
TU37523 lncRNA downstream 71811 53695950 ~ 53696768 (+) True G27972
TU37538 lncRNA downstream 89626 53713765 ~ 53715952 (+) True G27984
XM_022662592.1 mRNA upstream 794784 52825184 ~ 52829284 (+) False LOC103041583
XM_022662601.1 mRNA upstream 794784 52825184 ~ 52829284 (+) False LOC103041583
XM_022662581.1 mRNA upstream 794784 52825246 ~ 52829284 (+) True LOC103041583
XM_022662588.1 mRNA upstream 794784 52825246 ~ 52829284 (+) False LOC103041583
XM_022662560.1 mRNA upstream 807574 52811053 ~ 52816494 (+) True LOC111188773
XM_022662659.1 mRNA downstream 339423 53963562 ~ 54049416 (+) False epb41l2
XM_022662654.1 mRNA downstream 339423 53963562 ~ 54049416 (+) True epb41l2
XM_022662728.1 mRNA downstream 339423 53963562 ~ 54049416 (+) False epb41l2
XM_022662663.1 mRNA downstream 339423 53963562 ~ 54049416 (+) False epb41l2
XM_022662732.1 mRNA downstream 339423 53963562 ~ 54049416 (+) False epb41l2
trnam-cau_5 other upstream 379 53623617 ~ 53623689 (+) True trnam-cau_5
trnar-acg other upstream 547 53623449 ~ 53623521 (+) True trnar-acg
trnae-uuc_2 other upstream 815 53623182 ~ 53623253 (+) True trnae-uuc_2
trnah-gug other upstream 1174 53622823 ~ 53622894 (+) True trnah-gug
TU37261 other upstream 858893 52760113 ~ 52765175 (+) False LOC111188765
trnae-uuc_3 other downstream 288 53624427 ~ 53624498 (+) True trnae-uuc_3
trnar-acg_1 other downstream 555 53624694 ~ 53624766 (+) True trnar-acg_1
trnam-cau_6 other downstream 723 53624862 ~ 53624934 (+) True trnam-cau_6
trnah-gug_2 other downstream 1174 53625313 ~ 53625384 (+) True trnah-gug_2
trnae-uuc_4 other downstream 1533 53625672 ~ 53625743 (+) True trnae-uuc_4