RNA id: trnah-gug_5


Basic Information

Item Value
RNA id trnah-gug_5
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnah-gug_5
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53629048 ~ 53629119 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTGTGGCCGCAGCAACCCCGGTTCGAATCCGGGTCACGGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37481 lncRNA upstream 15041 53613777 ~ 53614007 (+) True G27935
TU37469 lncRNA upstream 51850 53576776 ~ 53577198 (+) True G27923
TU37463 lncRNA upstream 93823 53534600 ~ 53535225 (+) True G27917
TU37446 lncRNA upstream 124624 53499475 ~ 53504424 (+) True G27903
TU37398 lncRNA upstream 298271 53327872 ~ 53330777 (+) True G27875
TU37508 lncRNA downstream 45469 53674588 ~ 53675007 (+) True G27962
TU37511 lncRNA downstream 58580 53687699 ~ 53689734 (+) True G27964
TU37513 lncRNA downstream 62607 53691726 ~ 53693741 (+) True G27966
TU37523 lncRNA downstream 66831 53695950 ~ 53696768 (+) True G27972
TU37538 lncRNA downstream 84646 53713765 ~ 53715952 (+) True G27984
XM_022662592.1 mRNA upstream 799764 52825184 ~ 52829284 (+) False LOC103041583
XM_022662601.1 mRNA upstream 799764 52825184 ~ 52829284 (+) False LOC103041583
XM_022662581.1 mRNA upstream 799764 52825246 ~ 52829284 (+) True LOC103041583
XM_022662588.1 mRNA upstream 799764 52825246 ~ 52829284 (+) False LOC103041583
XM_022662560.1 mRNA upstream 812554 52811053 ~ 52816494 (+) True LOC111188773
XM_022662659.1 mRNA downstream 334443 53963562 ~ 54049416 (+) False epb41l2
XM_022662654.1 mRNA downstream 334443 53963562 ~ 54049416 (+) True epb41l2
XM_022662728.1 mRNA downstream 334443 53963562 ~ 54049416 (+) False epb41l2
XM_022662663.1 mRNA downstream 334443 53963562 ~ 54049416 (+) False epb41l2
XM_022662732.1 mRNA downstream 334443 53963562 ~ 54049416 (+) False epb41l2
trnam-cau_9 other upstream 379 53628597 ~ 53628669 (+) True trnam-cau_9
trnar-acg_4 other upstream 547 53628429 ~ 53628501 (+) True trnar-acg_4
trnae-uuc_6 other upstream 815 53628162 ~ 53628233 (+) True trnae-uuc_6
trnah-gug_4 other upstream 1174 53627803 ~ 53627874 (+) True trnah-gug_4
trnam-cau_8 other upstream 1624 53627352 ~ 53627424 (+) True trnam-cau_8
trnae-uuc_7 other downstream 288 53629407 ~ 53629478 (+) True trnae-uuc_7
trnar-acg_5 other downstream 555 53629674 ~ 53629746 (+) True trnar-acg_5
trnam-cau_10 other downstream 723 53629842 ~ 53629914 (+) True trnam-cau_10
trnah-gug_6 other downstream 1174 53630293 ~ 53630364 (+) True trnah-gug_6
trnae-uuc_8 other downstream 1533 53630652 ~ 53630723 (+) True trnae-uuc_8