RNA id: trnah-gug_8


Basic Information

Item Value
RNA id trnah-gug_8
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnah-gug_8
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53632783 ~ 53632854 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTGTGGCCGCAGCAACCCCGGTTCGAATCCGGGTCACGGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37481 lncRNA upstream 18776 53613777 ~ 53614007 (+) True G27935
TU37469 lncRNA upstream 55585 53576776 ~ 53577198 (+) True G27923
TU37463 lncRNA upstream 97558 53534600 ~ 53535225 (+) True G27917
TU37446 lncRNA upstream 128359 53499475 ~ 53504424 (+) True G27903
TU37398 lncRNA upstream 302006 53327872 ~ 53330777 (+) True G27875
TU37508 lncRNA downstream 41734 53674588 ~ 53675007 (+) True G27962
TU37511 lncRNA downstream 54845 53687699 ~ 53689734 (+) True G27964
TU37513 lncRNA downstream 58872 53691726 ~ 53693741 (+) True G27966
TU37523 lncRNA downstream 63096 53695950 ~ 53696768 (+) True G27972
TU37538 lncRNA downstream 80911 53713765 ~ 53715952 (+) True G27984
XM_022662592.1 mRNA upstream 803499 52825184 ~ 52829284 (+) False LOC103041583
XM_022662601.1 mRNA upstream 803499 52825184 ~ 52829284 (+) False LOC103041583
XM_022662581.1 mRNA upstream 803499 52825246 ~ 52829284 (+) True LOC103041583
XM_022662588.1 mRNA upstream 803499 52825246 ~ 52829284 (+) False LOC103041583
XM_022662560.1 mRNA upstream 816289 52811053 ~ 52816494 (+) True LOC111188773
XM_022662659.1 mRNA downstream 330708 53963562 ~ 54049416 (+) False epb41l2
XM_022662654.1 mRNA downstream 330708 53963562 ~ 54049416 (+) True epb41l2
XM_022662728.1 mRNA downstream 330708 53963562 ~ 54049416 (+) False epb41l2
XM_022662663.1 mRNA downstream 330708 53963562 ~ 54049416 (+) False epb41l2
XM_022662732.1 mRNA downstream 330708 53963562 ~ 54049416 (+) False epb41l2
trnam-cau_12 other upstream 379 53632332 ~ 53632404 (+) True trnam-cau_12
trnar-acg_7 other upstream 547 53632164 ~ 53632236 (+) True trnar-acg_7
trnae-uuc_9 other upstream 815 53631897 ~ 53631968 (+) True trnae-uuc_9
trnah-gug_7 other upstream 1174 53631538 ~ 53631609 (+) True trnah-gug_7
trnam-cau_11 other upstream 1624 53631087 ~ 53631159 (+) True trnam-cau_11
trnae-uuc_10 other downstream 288 53633142 ~ 53633213 (+) True trnae-uuc_10
trnar-acg_8 other downstream 555 53633409 ~ 53633481 (+) True trnar-acg_8
trnam-cau_13 other downstream 723 53633577 ~ 53633649 (+) True trnam-cau_13
trnah-gug_9 other downstream 1174 53634028 ~ 53634099 (+) True trnah-gug_9
trnae-uuc_11 other downstream 1534 53634388 ~ 53634459 (+) True trnae-uuc_11