RNA id: trnar-acg_7


Basic Information

Item Value
RNA id trnar-acg_7
length 73
RNA type tRNA
GC content 0.58
exon number 1
gene id trnar-acg_7
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53632164 ~ 53632236 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GGGCCAGTGGCGCAATGGATAACGCGTCTGACTACGGATCAGAAGATTCTAGGTTCGACTCCTGGCTGGCTCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37481 lncRNA upstream 18157 53613777 ~ 53614007 (+) True G27935
TU37469 lncRNA upstream 54966 53576776 ~ 53577198 (+) True G27923
TU37463 lncRNA upstream 96939 53534600 ~ 53535225 (+) True G27917
TU37446 lncRNA upstream 127740 53499475 ~ 53504424 (+) True G27903
TU37398 lncRNA upstream 301387 53327872 ~ 53330777 (+) True G27875
TU37508 lncRNA downstream 42352 53674588 ~ 53675007 (+) True G27962
TU37511 lncRNA downstream 55463 53687699 ~ 53689734 (+) True G27964
TU37513 lncRNA downstream 59490 53691726 ~ 53693741 (+) True G27966
TU37523 lncRNA downstream 63714 53695950 ~ 53696768 (+) True G27972
TU37538 lncRNA downstream 81529 53713765 ~ 53715952 (+) True G27984
XM_022662592.1 mRNA upstream 802880 52825184 ~ 52829284 (+) False LOC103041583
XM_022662601.1 mRNA upstream 802880 52825184 ~ 52829284 (+) False LOC103041583
XM_022662581.1 mRNA upstream 802880 52825246 ~ 52829284 (+) True LOC103041583
XM_022662588.1 mRNA upstream 802880 52825246 ~ 52829284 (+) False LOC103041583
XM_022662560.1 mRNA upstream 815670 52811053 ~ 52816494 (+) True LOC111188773
XM_022662659.1 mRNA downstream 331326 53963562 ~ 54049416 (+) False epb41l2
XM_022662654.1 mRNA downstream 331326 53963562 ~ 54049416 (+) True epb41l2
XM_022662728.1 mRNA downstream 331326 53963562 ~ 54049416 (+) False epb41l2
XM_022662663.1 mRNA downstream 331326 53963562 ~ 54049416 (+) False epb41l2
XM_022662732.1 mRNA downstream 331326 53963562 ~ 54049416 (+) False epb41l2
trnae-uuc_9 other upstream 196 53631897 ~ 53631968 (+) True trnae-uuc_9
trnah-gug_7 other upstream 555 53631538 ~ 53631609 (+) True trnah-gug_7
trnam-cau_11 other upstream 1005 53631087 ~ 53631159 (+) True trnam-cau_11
trnar-acg_6 other upstream 1173 53630919 ~ 53630991 (+) True trnar-acg_6
trnae-uuc_8 other upstream 1441 53630652 ~ 53630723 (+) True trnae-uuc_8
trnam-cau_12 other downstream 96 53632332 ~ 53632404 (+) True trnam-cau_12
trnah-gug_8 other downstream 547 53632783 ~ 53632854 (+) True trnah-gug_8
trnae-uuc_10 other downstream 906 53633142 ~ 53633213 (+) True trnae-uuc_10
trnar-acg_8 other downstream 1173 53633409 ~ 53633481 (+) True trnar-acg_8
trnam-cau_13 other downstream 1341 53633577 ~ 53633649 (+) True trnam-cau_13