RNA id: trnas-uga_9


Basic Information

Item Value
RNA id trnas-uga_9
length 82
RNA type tRNA
GC content 0.51
exon number 1
gene id trnas-uga_9
representative True

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53651947 ~ 53652028 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GTAGtcgtggccgagtggttaaggcgatggacTTGAAATCCATTGTGGTCTCCTTGCGTAGGTTCAGTTCCTGACGACTACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37481 lncRNA upstream 37940 53613777 ~ 53614007 (+) True G27935
TU37469 lncRNA upstream 74749 53576776 ~ 53577198 (+) True G27923
TU37463 lncRNA upstream 116722 53534600 ~ 53535225 (+) True G27917
TU37446 lncRNA upstream 147523 53499475 ~ 53504424 (+) True G27903
TU37398 lncRNA upstream 321170 53327872 ~ 53330777 (+) True G27875
TU37508 lncRNA downstream 22560 53674588 ~ 53675007 (+) True G27962
TU37511 lncRNA downstream 35671 53687699 ~ 53689734 (+) True G27964
TU37513 lncRNA downstream 39698 53691726 ~ 53693741 (+) True G27966
TU37523 lncRNA downstream 43922 53695950 ~ 53696768 (+) True G27972
TU37538 lncRNA downstream 61737 53713765 ~ 53715952 (+) True G27984
XM_022662592.1 mRNA upstream 822663 52825184 ~ 52829284 (+) False LOC103041583
XM_022662601.1 mRNA upstream 822663 52825184 ~ 52829284 (+) False LOC103041583
XM_022662581.1 mRNA upstream 822663 52825246 ~ 52829284 (+) True LOC103041583
XM_022662588.1 mRNA upstream 822663 52825246 ~ 52829284 (+) False LOC103041583
XM_022662560.1 mRNA upstream 835453 52811053 ~ 52816494 (+) True LOC111188773
XM_022662659.1 mRNA downstream 311534 53963562 ~ 54049416 (+) False epb41l2
XM_022662654.1 mRNA downstream 311534 53963562 ~ 54049416 (+) True epb41l2
XM_022662728.1 mRNA downstream 311534 53963562 ~ 54049416 (+) False epb41l2
XM_022662663.1 mRNA downstream 311534 53963562 ~ 54049416 (+) False epb41l2
XM_022662732.1 mRNA downstream 311534 53963562 ~ 54049416 (+) False epb41l2
trnas-aga_6 other upstream 800 53651066 ~ 53651147 (+) True trnas-aga_6
trnas-uga_8 other upstream 986 53650880 ~ 53650961 (+) True trnas-uga_8
trnal-cag_5 other upstream 1152 53650713 ~ 53650795 (+) True trnal-cag_5
trnal-cag_4 other upstream 1527 53650338 ~ 53650420 (+) True trnal-cag_4
trnal-cag_3 other upstream 1902 53649963 ~ 53650045 (+) True trnal-cag_3
trnal-cag_6 other downstream 107 53652135 ~ 53652217 (+) True trnal-cag_6
trnas-uga_10 other downstream 480 53652508 ~ 53652589 (+) True trnas-uga_10
trnas-aga_7 other downstream 829 53652857 ~ 53652938 (+) True trnas-aga_7
trnas-aga_8 other downstream 1621 53653649 ~ 53653730 (+) True trnas-aga_8
TU37650 other downstream 726213 54378241 ~ 54379306 (+) True G28072